ggKbase home page

scnpilot_p_inoc_scaffold_3365_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1093..3750

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated helicase, Cas3 family n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARI0_PELPD similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 878.0
  • Bit_score: 1218
  • Evalue 0.0
  • rbh
CRISPR-associated helicase Cas3; K07012 Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 886.0
  • Bit_score: 1238
  • Evalue 0.0
CRISPR-associated helicase Cas3 similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 878.0
  • Bit_score: 1218
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2658
ATGGCGAACGAAGCGAACCATCTGAGGTTTATTTGGGCAAAGAGCGACAAGACCGAGGGCGAGCGCTGGCATCCACTTATCCTCCACCTGTTGGATGTGGCAGCAAGCGCCGACACCATTCTGGCGCGCGAACCGGAAAGTACGCGGAACAGACTGGCCGGTGTGCTTGGTTTGAATTGGTCAGCGGCTCACCCCTGGCTTCTGCTGCTTATTGCCTGCCACGATCTAGGCAAGGCATGCCCCGGCTTTCAGTGCAAATGGAAAAACCTGTCGGAAATGGATGCCGGGCGCAGTCCGAATACCGATATCAACCACGCTTTCGTGAGCCAGATCGAACTGGTCGGGTTGTTGGTTGAAACAGGCTGGTCGGCGGATTTAGCAGATTTGGCTGCCGATGCAGTAGGTTGTCATCATGGCGAGCGTGCTTCGCCCAGCACCCTGAATCACCTGATGGGTGACAGGCGTGCGCTGGGCAAAAGCGAATGGAGCGAGGCACGGCTCGCAATTTTTCAGGCTTTGCTCGAATTGTTCGCGCCCGGCGAGCCACCCACAAAAGTCAATATGTCTGGCTCCGATTTCATGCTGTTATCCGGGCTGACAAGCTTCGCCGACTGGGTCGGGTCGAATGAGGCCTGGTTTCCCTTCGGCACGCCAAAGGATTGCGAAGACCTTCATTCCTGGTTCCAGGTGCGCAGAAGCAGAAACGCGGAACAGGCGCTGAACGCGATGGGTTGGGACGCGCGTATTCCCCTAGCATCCGGGTACAAGCCATTCGAGGACGTTTTCGGCTTCGCGCCACGACCCTTGCAACAAGCTGTCGCCGACGCCCTCGCGGACTTGCTACAGCCTTCCATCCTGCTGGTGGAAGCGCCGATGGGCGAAGGCAAGACCGAGGCGGCGTTTTACGCGCATCTTGAACTGCAACGCCGGTTCGGCCATCGCGGCCTGTATGTCGCGCTGCCGACCAAGGCGACCGGCAACGCCATGTTCAAGCGTACGCTGAAATTCCTGCGCAGCCAGAACGCCACCCGGCAGCTCGATTTGCAGTTGCTGCATGGCGGCGCATTGCTGAACGACGATTACCAGCAACTCAAGCCTAGCGGCATTCACGATCCGCAGGCGGGCGGGGATGTGCGCGCTGGCGAATGGTTTACCCACAAGAAACGTGCCCTGCTTTCGGAATACGGCGTCGGCACGGTCGATCAGGCTTTGCTGACGATCCTGCCGGTGCGTCATCAGTTTGTCCGCTTGTGGGGCTTGGCGAACCGGGTAGTCGTTTTCGACGAGATTCATGCCTACGACGCCTACACTGGCACGCTGCTGATTCATTTGCTGCGCTGGTTGCTGGCGCTGGGCTCGTCGGTGCTACTGCTCTCAGCAACCTTGCCTCCCGATATTCGGCGCAAACTGGCAGCGCTGACGAACGCAGCTTCCCCCGAGCAAGAGGTGGATTACCCGCGCCTCTCCGTGTATTCGACTGGCCAACCCGTTCGACAAATCGCTTTTGAGGCCGACCCCGCAAGGCATTTGCCCTTGCACATCCAACCCATCGCTTCTGATCTTGCCTCCATGCGCGAAGCTCTGGATATCCGGCTTTCCCAAGGCGGATTCGCGCTGGCTTTGGCCAACACGGTGCAGCGTGCCCAAGCGCTGTATCGCCTCTACCCTGACGGCGAACCGCTAACATTTGAAGGTCAGCCGGTCGGCAAACGTCTGGCAGATGGCACCGAGATTGTTCTCTTCCATGCGCGTTTCCCGGCAGACCAGCGGCAACAGCGGGAGAATGCAGTCTTGCAAGTCTTCGGGTTCAACGGCGAACGCTCAGGTACAAAAATCCTCATCGCCACGCAGGTTGCCGAGCAAAGCCTCGATCTGGACTTTGATCTCATCGCCACCGATCTGGCACCTATCGACTTGCTGTTGCAACGTGCGGGGCGGCTGTGGCGGCACACGCGCGCTTCCCGGCCTGTCGCTGTGCCAACGCTGCTCGTGGCGGGCCTTGCCGAAGAAACGCCGCCTTCGTTTGATCGCCCGCTGTGGTGGGGGGCGGTTTATCGGGAAGACATCCTGCTGCGCACCTGGTGCTTGCTGCGCGGCAAGGAACAGATCGCCCTGCCCGCTGAAATCGACACGCTGGTGCAGGCTGTCTACGAGGAACAAGTCGAAGTGCCCGAAGCCTTGCAGGAGCGTTTGCAAAAGTCTCTGATCGACGGCGATGGCAAAGCGATTTCCCATACCGGCCAGGCTAACAAGGCGATCATCGGCTTCCCCGACGACGCCTCATGGAACGACCCGGCCAGATTCAGCCTATACGACGAAGACGAACCCGGCGTGCATCGCACCCTCATGGCGCAAACCCGGCTCGGCGACGACTCCGTCATCGCCATTCCACTATGGGAAACGGACGACTTCGATGCCACAGCAACACCCAATTTCCAGCAATCGAAAGCCTGGTTCCTGCGCGCCATGAGTCTGTCGCGCAAAGGTATCGTCAAAAAACTCCAGGCTGAGGGCGTTCCAGAGGCCTGGAAAAAAAGTGCTCTACTGCGCAATGCTTACCCCCTGATGCTGAATGAGACGAGCCACTGGATCGACGACGCGACCGTTCGTCTCGACAGTGATCTGGGTCTGGTATACGAACCCAAGGAGACTGAATGA
PROTEIN sequence
Length: 886
MANEANHLRFIWAKSDKTEGERWHPLILHLLDVAASADTILAREPESTRNRLAGVLGLNWSAAHPWLLLLIACHDLGKACPGFQCKWKNLSEMDAGRSPNTDINHAFVSQIELVGLLVETGWSADLADLAADAVGCHHGERASPSTLNHLMGDRRALGKSEWSEARLAIFQALLELFAPGEPPTKVNMSGSDFMLLSGLTSFADWVGSNEAWFPFGTPKDCEDLHSWFQVRRSRNAEQALNAMGWDARIPLASGYKPFEDVFGFAPRPLQQAVADALADLLQPSILLVEAPMGEGKTEAAFYAHLELQRRFGHRGLYVALPTKATGNAMFKRTLKFLRSQNATRQLDLQLLHGGALLNDDYQQLKPSGIHDPQAGGDVRAGEWFTHKKRALLSEYGVGTVDQALLTILPVRHQFVRLWGLANRVVVFDEIHAYDAYTGTLLIHLLRWLLALGSSVLLLSATLPPDIRRKLAALTNAASPEQEVDYPRLSVYSTGQPVRQIAFEADPARHLPLHIQPIASDLASMREALDIRLSQGGFALALANTVQRAQALYRLYPDGEPLTFEGQPVGKRLADGTEIVLFHARFPADQRQQRENAVLQVFGFNGERSGTKILIATQVAEQSLDLDFDLIATDLAPIDLLLQRAGRLWRHTRASRPVAVPTLLVAGLAEETPPSFDRPLWWGAVYREDILLRTWCLLRGKEQIALPAEIDTLVQAVYEEQVEVPEALQERLQKSLIDGDGKAISHTGQANKAIIGFPDDASWNDPARFSLYDEDEPGVHRTLMAQTRLGDDSVIAIPLWETDDFDATATPNFQQSKAWFLRAMSLSRKGIVKKLQAEGVPEAWKKSALLRNAYPLMLNETSHWIDDATVRLDSDLGLVYEPKETE*