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scnpilot_p_inoc_scaffold_6360_10

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 6169..6426

Top 3 Functional Annotations

Value Algorithm Source
Amino acid transporter LysE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIG5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 161
  • Evalue 3.70e-37
Amino acid transporter LysE {ECO:0000313|EMBL:EYR84142.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 161
  • Evalue 5.20e-37
eamB; amino acid transporter LysE similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 86.0
  • Bit_score: 106
  • Evalue 3.10e-21

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGATTGGGCTTGGATACTGGCGACCACGGGTTTCGCATTCGCCATGGCGGGCACGCCAGGGCCGAACAATGCGATGGTAACGGCCTTGGGTGCCAACCATGGTTTTCGCCGAACGCTGCCGGCGGCCATCGGCATGGGTGCCGGTGTCGCCGTCATCATCTTCGCTGTCGCAGCTGCGGGGGGGCCCATCGTCACCGAGCCGCGCGTGCATATGGTGCTGAAATGGGCCGGCGTTGCCTATCTTCTCTGGCTTTCC
PROTEIN sequence
Length: 86
MDWAWILATTGFAFAMAGTPGPNNAMVTALGANHGFRRTLPAAIGMGAGVAVIIFAVAAAGGPIVTEPRVHMVLKWAGVAYLLWLS