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scnpilot_p_inoc_scaffold_6360

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_6360_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..433
DNA (432bp) protein (144aa)
conjugal transfer protein TrbG n=1 Tax=Rhizobium giardinii RepID=UPI00036A2334
Putative conjugal transfer protein TrbG {ECO:0000313|EMBL:CDN95708.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac
trbG; conjugal transfer protein TrbG
scnpilot_p_inoc_scaffold_6360_2
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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437..880
DNA (444bp) protein (148aa)
TrbH n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL04_9RHIZ
TrbH {ECO:0000313|EMBL:AFR74948.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium
trbH; putative conjugal transfer protein trbH
scnpilot_p_inoc_scaffold_6360_3
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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893..2188
DNA (1296bp) protein (432aa)
TrbI n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL62_9RHIZ rbh
TrbI {ECO:0000313|EMBL:AFR74947.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium
trbI; putative conjugal transfer protein trbI rbh
scnpilot_p_inoc_scaffold_6360_4
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2229..2891)
DNA (663bp) protein (221aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=430451 species="Ba
TraI n=1 Tax=Sinorhizobium sp. M14 RepID=R4ILG8_9RHIZ rbh
cinI; autoinducer synthesis protein
scnpilot_p_inoc_scaffold_6360_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3010..3729)
DNA (720bp) protein (240aa)
LuxR n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL88_9RHIZ rbh
DNA-binding protein with HTH domain containing protein {ECO:0000313|EMBL:CDN95712.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_6360_6
unknown

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3805..4029
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035D53C8
scnpilot_p_inoc_scaffold_6360_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4285..4584
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036CF5A1
Transcriptional repressor TraM {ECO:0000313|EMBL:CDN95713.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
traM; transcriptional repressor
scnpilot_p_inoc_scaffold_6360_8
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4599..5390)
DNA (792bp) protein (264aa)
TraR n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL00_9RHIZ rbh
TraR {ECO:0000313|EMBL:AFR74943.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium
traR; LuxR-type transcriptional regulator protein TraR
scnpilot_p_inoc_scaffold_6360_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5580..6038)
DNA (459bp) protein (153aa)
Transcriptional regulator AzlB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYK0_9RHIZ
Transcriptional regulator AzlB {ECO:0000313|EMBL:EYR84143.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dadR; alanine catabolic operon transcriptional regulator protein
scnpilot_p_inoc_scaffold_6360_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6169..6426
DNA (258bp) protein (86aa)
Amino acid transporter LysE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIG5_9RHIZ
Amino acid transporter LysE {ECO:0000313|EMBL:EYR84142.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
eamB; amino acid transporter LysE
Displaying 10 items

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