ggKbase home page

scnpilot_p_inoc_scaffold_6360_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2229..2891)

Top 3 Functional Annotations

Value Algorithm Source
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=430451 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 220.0
  • Bit_score: 436
  • Evalue 2.80e-119
TraI n=1 Tax=Sinorhizobium sp. M14 RepID=R4ILG8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 220.0
  • Bit_score: 437
  • Evalue 9.00e-120
  • rbh
cinI; autoinducer synthesis protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 221.0
  • Bit_score: 298
  • Evalue 1.40e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium sp. M14 → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
TTGTTCATTCTGGTTCAGGCGCATCAGTACACCCGTTATAAACCTCTCATGGATCAGGCATTTCGCCTGCGAAAACGCGTGTTTCACGATCAACTCGGTTGGGCCGTGACAATCGACGGTGATTGCGAGCGCGACGAGTACGATGCTCTGCGGCCGGCTTACCTGATGTGGTGCAATGATCGCGCGGATCGCCTTTACGGAACGCTGCGGCTGATGCCAACCACCGGCCCGACGCTTCTCTACGACGTCTTCCGCGACACGTTTGCGGGTGCCAGCCTGATCGCACCCGGAATATACGAAGGAACGAGAATGTGCCTCGATGAGGAAACACTCTCCGAGGATTTTCCGAGCCTGGAAATAGGGAAAGCTTTCGGCATGCTGTTGCTGGCATTGTGCGAATGCGGATTGTCGCACGGTATCGAGACGCTGGTCTCGAACTACGAGCCGCACCTGGCGCGGGTCTATCGTCGGGCGGGGCTCGCCGTTGAAGAGGTCGGCCGTGCGGACGGCTATGGTCGCTCTCCGGTTTGCTGCGGTATCTTCGAAGTTTCAGAGGAAGTTCGCACGCGCATGCAGCAGGCGCTCGGTGTCGCGGCTCCCCTCTATGCAGGATATCGCCCGCGCAAAATTGCAGCCAGCGAGCCCGTGCGCATATCGGCCTGA
PROTEIN sequence
Length: 221
LFILVQAHQYTRYKPLMDQAFRLRKRVFHDQLGWAVTIDGDCERDEYDALRPAYLMWCNDRADRLYGTLRLMPTTGPTLLYDVFRDTFAGASLIAPGIYEGTRMCLDEETLSEDFPSLEIGKAFGMLLLALCECGLSHGIETLVSNYEPHLARVYRRAGLAVEEVGRADGYGRSPVCCGIFEVSEEVRTRMQQALGVAAPLYAGYRPRKIAASEPVRISA*