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scnpilot_p_inoc_scaffold_6360_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3010..3729)

Top 3 Functional Annotations

Value Algorithm Source
LuxR n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 2.40e-126
  • rbh
DNA-binding protein with HTH domain containing protein {ECO:0000313|EMBL:CDN95712.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 239.0
  • Bit_score: 460
  • Evalue 1.50e-126
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 230.0
  • Bit_score: 294
  • Evalue 2.20e-77

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
TTGACAGGACCTCTCGCCGATTTTTCCGACCTCAAGGAGCGCCTTGCAAAGACGGGCTCGGTGACCGAAGCGCTCCATTTCATACAGTCGGTCTATCGCGTCGATTTCATAACCTACCACCTTGCTTCGACGGTGGTTGGTGATTTTGACGCGCCGTTCGTGCGGACAACCTACCCGGATGCGTGGGTATCCACCTATCTATTGAAGGGCTATGTCACCATCGATCCTGTCGCGCGCGAGGGCTTTCTGCGCCAGCTGCCATTCGATTGGCGAGAGCTCGAAGTCGCGCCCGAGATGCTGATGTTTCTGGAAGACGCAATAAGCCATGGGATCGGCCGCTTTGGTTTTTCCATCCCGATATCGGATAAAGCAGGCCGACGGGCCATCCTCTCTTTGAATTCGAACGCGTCCGCCGAAGACTGGGAGGATATGGTCGGTGCTCATCGGAGTGAGTGGGTCGATCTCGCGTATCTCGTCCACCAGATGGCAGTGTTCGAGCTACATGGAGCGAGCGATCCGATTCCGGTCTTGAGTCCGCGGGAACGTGAGTGCCTCTACTGGAGCGCGCTCGGCAAGGATTACAAGGATATCGCGCTTATTCTCGGCCTTTCCCATCACACGACCCGCAGCTACATCAAGTCGGCCAGGACGAAACTTGGTTGCGCCACGATCTCGGCGGCGGCCACTCTTGCCCTTAAGCTACGCGTGATCGCGATATGA
PROTEIN sequence
Length: 240
LTGPLADFSDLKERLAKTGSVTEALHFIQSVYRVDFITYHLASTVVGDFDAPFVRTTYPDAWVSTYLLKGYVTIDPVAREGFLRQLPFDWRELEVAPEMLMFLEDAISHGIGRFGFSIPISDKAGRRAILSLNSNASAEDWEDMVGAHRSEWVDLAYLVHQMAVFELHGASDPIPVLSPRERECLYWSALGKDYKDIALILGLSHHTTRSYIKSARTKLGCATISAAATLALKLRVIAI*