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scnpilot_p_inoc_scaffold_6360_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4285..4584

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036CF5A1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 192
  • Evalue 1.70e-46
Transcriptional repressor TraM {ECO:0000313|EMBL:CDN95713.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 193
  • Evalue 1.10e-46
traM; transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 99.0
  • Bit_score: 106
  • Evalue 6.00e-21

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGACGCCGACGACCGATTGAATGGCGAGGCAGTCGATCTGAAGCCGCTGATAGGGCTCTTGCATGGGCTTCCGTCACCGCTCGTTGAGCGTCTCACGATCGATGCAATCCGCGAACATCGGGATCTATTGGAGCGGGCAGAAAATCTGTTCAATGAACTGCCGGCTGACGTTAAAGCCGGCAAGGAGCTTGTTAGCGATACCCATATTGCCTATCTCGAAGCAACCATCAGGATGCACGCGCAAATGTCGGCGCTGACCACCCTCCTGCACATTCTGGGCTATACGCCCAAGGCCTGA
PROTEIN sequence
Length: 100
MDADDRLNGEAVDLKPLIGLLHGLPSPLVERLTIDAIREHRDLLERAENLFNELPADVKAGKELVSDTHIAYLEATIRMHAQMSALTTLLHILGYTPKA*