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scnpilot_p_inoc_scaffold_6360_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(4599..5390)

Top 3 Functional Annotations

Value Algorithm Source
TraR n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL00_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 167.0
  • Bit_score: 315
  • Evalue 6.10e-83
  • rbh
TraR {ECO:0000313|EMBL:AFR74943.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 167.0
  • Bit_score: 315
  • Evalue 8.60e-83
traR; LuxR-type transcriptional regulator protein TraR similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 165.0
  • Bit_score: 177
  • Evalue 5.60e-42

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Taxonomy

Sinorhizobium sp. M14 → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGCCTTCATGGAAGGGTGGGTTCATGACGATGAGATCGTAGTGGTCGCGCGGCGTCTCGGCCGTCAGGTCGAACCAGTAGTAGCGGGCGGGGATGTTCGGGCAATTCTCCGCCATGTTCTCCTTGGCGGCTTCCAGCGCCTCGTAGTGCGCCTCGAAGAGGTCGATGCCCTTCACCTGCGGTGCGCGGCCGCCGAACATGACGGAGAGATAACCCCAGCCCGCGCCGAAATCGGCGGCATGGCCATTGAAATCTTCGGGAATGCGGGTGGCGAGCAACTCGGAACCTTCATCGATCCGGTCATGCGGCAAGCCCAGCTGATTAGGCGCGCTTTCGCCTGGTCCGGCGAAGCTAACAAGAGCTCGCTGACAAAAGAGCAGAAAAACTTCTTTTCGAAAGCCGCTGATTTCAACATTCGCTCGGGCGTTTCCATCCCGGTCGCCACCGCCAACGGTGCGATGTCCATGCTGACCTTTGCATCGGCGAAGCCTTCTCTTGCCAGTGATATGGAGATTGATGCCATTATGGCTGCATCAGCGGTCGCTCAACTTCATGCCCGTCTTGAGCACATGCGGGTCACGCCCTCCATCGAGGAAAAGATCGTCCTGACGCCGAAGCAGGTGAACTACATCCGCTGGCTTTCGCTTGGCAAAACCGTCGAGGTGATCGCTGAACTGGAGCAGGCAAAGTATGCTGGAGTCCGCTCTGCGATTGACGATGTCAGAACGCGCTACAATCTGGCCAATCATGCGCAGGTGGTGGCTTTGGCTATCCGACGCGGCCTGATTTAG
PROTEIN sequence
Length: 264
MAFMEGWVHDDEIVVVARRLGRQVEPVVAGGDVRAILRHVLLGGFQRLVVRLEEVDALHLRCAAAEHDGEITPARAEIGGMAIEIFGNAGGEQLGTFIDPVMRQAQLIRRAFAWSGEANKSSLTKEQKNFFSKAADFNIRSGVSIPVATANGAMSMLTFASAKPSLASDMEIDAIMAASAVAQLHARLEHMRVTPSIEEKIVLTPKQVNYIRWLSLGKTVEVIAELEQAKYAGVRSAIDDVRTRYNLANHAQVVALAIRRGLI*