ggKbase home page

scnpilot_p_inoc_scaffold_5681_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2732..3244)

Top 3 Functional Annotations

Value Algorithm Source
Putative copper-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJN1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 4.00e-59
blue (type 1) copper domain protein similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 161.0
  • Bit_score: 235
  • Evalue 1.10e-59
Putative copper-binding protein {ECO:0000313|EMBL:AGU52766.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 5.60e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAAAATCAAATCCCTCATCGCCGCACTCTCAACGGCATTGCTTGCCCAGGCTGCCTTTGCCGCCGGCGACCATGCCGGTGGCCATCACGGCGACTCCAATGCCATCGGGCAAGCCGGCAATGCCGCCAAGGTGACGCGCACCATCGCTGTGGACATGACCGATGCCATGCGCTTTACACCCGCTGACATCGCTGTCGAACAAGGTGAAACCATCAGGTTTGTGGTCAAGAACACCGGCAAACTTAAGCATGAAATGGTCTTGGGTACTGAGGAGGAATTGAAAGAGCACTACGAGGTGATGAAAAAATACCCCGAGATGGAACACGCCGATGAAAATCAAGTCACCGTCGCACCGGGAAAATTCGGTGAAATCATCTGGCAATTCACCAAGGCCGGGAAGGTGAATTTTGCGTGCCTGCAACCGGGTCACTACGACGCTGGCATGAAGGGCGCTGTGGCTGTGAGCGGAAAAGTCGTGGCAGGTGATGCTCACACCATGCACAAACATTAA
PROTEIN sequence
Length: 171
MKIKSLIAALSTALLAQAAFAAGDHAGGHHGDSNAIGQAGNAAKVTRTIAVDMTDAMRFTPADIAVEQGETIRFVVKNTGKLKHEMVLGTEEELKEHYEVMKKYPEMEHADENQVTVAPGKFGEIIWQFTKAGKVNFACLQPGHYDAGMKGAVAVSGKVVAGDAHTMHKH*