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scnpilot_p_inoc_scaffold_6742_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3287..5722)

Top 3 Functional Annotations

Value Algorithm Source
TrbE n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 811.0
  • Bit_score: 1596
  • Evalue 0.0
  • rbh
Putative conjugal transfer protein TrbE {ECO:0000313|EMBL:CDN95703.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobac similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 811.0
  • Bit_score: 1602
  • Evalue 0.0
trbE; conjugal transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 809.0
  • Bit_score: 1470
  • Evalue 0.0
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2436
ATGGTCGCTTTGCGTTCCCTTCGCCCGTCTGCACCGTCGTTCGCCGATCTCGTGCCCTATGCCGGACTGGTCGACAATGGGATCATTCTTCTCAAGGACGGAAGTCTCATGGCGGGGTGGTATTTTGCCGGCCCTGACTCCGAGAGCGCCACGGATTTCGAGCGCAACGAGCTGTCCCGTCAGATCAATACGATCCTTTCAAGGCTGGGTTCCGGCTGGATGATCCAGGTCGAGGCCGTGCGCATCCCAACGACTGACTATCCTTCTGCGGAACGCAGTCATTTCCCCGATGCTGTCACTCGCATGATCGATGATGAGCGACGCAAGCACTTCGAACAGGAGCGCGGGCATTTCGAGAGCCGGCATGCGCTCGTCCTGACATATCGCCCTCCCGAGCGCCGACGATCTGGCGTCACGCGTTATATCTACTCGGACACTGAGAGCCGGACGGCGACATATGCCGACACGGTGCTCGACAGTTTCAGGCGCTCCACCCGAGAGATTGAGCAGTACCTCGGCAACGTCATCTCCATTGAGCGTATGCGGACGCGTGAGGTGCCGGAACGCGGTGGCACCCGCATTGCCCGCTACGATGAGCTTTTCCAGTTCATCCGGTTCTGCATCACCGGTGAAAACCACCCAGTCCGTCTACCTGAAATTCCCATGTATTTGGATTGGCTAGCGACCGCGGAGCTGGAGCACGGCCTTACCCCGAAGGTCGAAAACCGGTTCCTCAGCGTGATTGCGATCGACGGTTTGCCGGCCGAGAGCTGGCCAGGCATCTTGAATAGCCTCGATCTCTTGCCGCTCACCTACCGCTGGTCGTCGCGCTTTATCTTTCTGGATGCTGAGGAAGCCAAACAGCGGTTGGAGCGCACGCGCAAGAAATGGCAGCAAAAGGTACGGCCTTTCTTCGACCAACTCTTCCAGACACAGAGCCGATCGGTTGACCAAGACGCAATGGCGATGGTCGCGGAGACTGAAGACGCTATCGCCGAGGCTTCTTCGCAGCTGGTCGCTTATGGCTATTACACGCCGGTGATCATCCTGTTCGACGAGAGCAGAGAAAATCTTGCCGATAAAGCCGAGTCCGTTCGAAGGTTGATCCAGGCTGAAGGATTTGGCGCGCGGATCGAGACGTTGAATGCGACAGACGCGTTCCTCGGGAGCCTGCCAGGCAACTGGTACTGCAACATCCGGGAACCGCTGATAAACACCCGCAACCTCTCTGACCTGATCCCCCTCAATTCCGTCTGGTCGGGCAGTCCGCTTGCGCCCTGCCCGTTCTATCCATCCGACGCGCCGCCACTGACACAGGTGGCTTCCGGATCGTCACCCTTCCGGCTGAACCTTCACGTGGATGATGTCGGGCATACGCTTATTTTCGGACCAACCGGTTCCGGCAAGTCAACGCTTCTCGCGCTCATCGCAGCGCAATTTCGCCGGTATCGGGGTGCGCAGGTTTTCGCCTTCGACAAAGGCAACTCTATTCTGCCGCTGACGCTGGCCGTGGATGGCAATCATTACGAAATCGGCGGCGAGGCAGGGGAGGGGGCTAGGCTTGCCTTTTGCCCTCTCTCCGACCTCTCGACCGATACCGACCGCGCCTGGGCTTCCGAATGGATCGAAACACTCGTCTCCCTGCAGGGTGTCACGGTCACCCCGGACTACCGAAACGCCATATCTCGGCAGATCGGTTTGATGGCGGGGGCTCCAGGCCGGTCGCTGTCGGATTTTGTGAGCGGCGTGCAGATGCGGGAGATCAAGGACGCGTTGCACCACTACACTGTTGACGGCCCCATGGGCCAACTTCTCGACGCTGAACGGGATTCGCTAACCCTCGGTCTGTTCCAGTGCTTCGAGATCGAGCAACTGATGAATATGGGCGAGCGAAATCTCGTCCCCGTGCTGACCTATCTGTTTCGCCGGATCGAAAAACGGCTCACGGGGGCACCAAGCCTCATCATTCTCGATGAGGCTTGGCTGATGCTCGGCCACCCGGTGTTCCGCGACAAGATCCGCGAGTGGCTGAAGGTGCTGCGAAAGGCAAACTGCGCTGTCGTTCTCGCCACACAGTCAATTTCGGACGCAGAGCGCTCGGGCATCACCGATGTCCTGAAGGAATCCTGCCCAACCAAGATCTGCCTCCCGAATGGGGCTGCCCGCGAGTCCGGGACACGAGAATTCTATGAGCGCATCGGCTTTAATCCTCGCCAAATCGAAATCGTCGCAGCCGCTATTCCAAAGCGGGAGTATTACGTGACGTCGCCGGACGGACGCCGCCTTTTCGATATGGCGCTGGGGCCGCTCACCCTCTCCTTCGTCGGTGCTTCCGGCAAAGCCGACCTCGCTCGGATCCGGGAACTTCTCTCAACCTACGGCAAAGACTGGCCGACCCAATGGCTCAATGAAAGAGGGATCAATCGCTATGCTTGA
PROTEIN sequence
Length: 812
MVALRSLRPSAPSFADLVPYAGLVDNGIILLKDGSLMAGWYFAGPDSESATDFERNELSRQINTILSRLGSGWMIQVEAVRIPTTDYPSAERSHFPDAVTRMIDDERRKHFEQERGHFESRHALVLTYRPPERRRSGVTRYIYSDTESRTATYADTVLDSFRRSTREIEQYLGNVISIERMRTREVPERGGTRIARYDELFQFIRFCITGENHPVRLPEIPMYLDWLATAELEHGLTPKVENRFLSVIAIDGLPAESWPGILNSLDLLPLTYRWSSRFIFLDAEEAKQRLERTRKKWQQKVRPFFDQLFQTQSRSVDQDAMAMVAETEDAIAEASSQLVAYGYYTPVIILFDESRENLADKAESVRRLIQAEGFGARIETLNATDAFLGSLPGNWYCNIREPLINTRNLSDLIPLNSVWSGSPLAPCPFYPSDAPPLTQVASGSSPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQFRRYRGAQVFAFDKGNSILPLTLAVDGNHYEIGGEAGEGARLAFCPLSDLSTDTDRAWASEWIETLVSLQGVTVTPDYRNAISRQIGLMAGAPGRSLSDFVSGVQMREIKDALHHYTVDGPMGQLLDAERDSLTLGLFQCFEIEQLMNMGERNLVPVLTYLFRRIEKRLTGAPSLIILDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGITDVLKESCPTKICLPNGAARESGTREFYERIGFNPRQIEIVAAAIPKREYYVTSPDGRRLFDMALGPLTLSFVGASGKADLARIRELLSTYGKDWPTQWLNERGINRYA*