ggKbase home page

scnpilot_p_inoc_scaffold_20048_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1107..1442

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=4 Tax=Variovorax RepID=C5CP51_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 6.30e-53
rplW; 50S ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 1.80e-53
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 111.0
  • Bit_score: 214
  • Evalue 8.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAGCCGCGTGAACCCTACCGCCGCTGAACGTACGTTCGAAGAAGGCCGCCTGATGGCGGTGCTGGTCGCCCCGATCGTGTCCGAAAAGGCCACGATGGTCGGCGAGAAGTCGAACGCTGTCACTTTCAAGGTGCTGCAAGACGCCACCAAGCCCGAGATCAAGGCCGCTGTCGAACTGATGTTCAAGGTCGAAGTCCAGGGCGTGTCGGTGCTCAACACCAAGGGCAAGACCAAGCGCTTTGGCAAGTCCATCGGCCGCCGCGACAACGTGCGCAAGGCCTATGTGACCCTGAAGCCGGGTCAAGAGCTCAACCTCGTCGGGGAAGGCGCTTAA
PROTEIN sequence
Length: 112
MSRVNPTAAERTFEEGRLMAVLVAPIVSEKATMVGEKSNAVTFKVLQDATKPEIKAAVELMFKVEVQGVSVLNTKGKTKRFGKSIGRRDNVRKAYVTLKPGQELNLVGEGA*