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scnpilot_p_inoc_scaffold_22190_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1840..2232

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4DVS5_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 128
  • Evalue 6.90e-27
Coffea canephora DH200=94 genomic scaffold, scaffold_4 {ECO:0000313|EMBL:CDO99648.1}; TaxID=49390 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophy similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 129
  • Evalue 2.50e-27
pre-mRNA-splicing factor SYF1-like similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 124.0
  • Bit_score: 126
  • Evalue 6.30e-27

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Taxonomy

Coffea canephora → Coffea → Gentianales → asterids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 393
ATGAAGGTTCTCGCGCGCGCCTGCGCGGCTGTGCCCGCAGCGACGCGCCTCGAGATGTACCTTGTGTACCTGGTCAAGGCCAGCGAGGCCTACGGCGCGGTGCGCACCCGCGACATCTTCGACCAGGCGCTGCAGGCGCTGCCCGACAGCGCTGTCCCGCTCATCGGCGCGCGCTACGCTGCGCTGGAGCGCGCGCTGGGCGAGATTGACCGCGCGCGCGGCGTGTACAAGTATTGCGCGCAATATTGCGACCCCAAGACAGAGGAGCGTTTCTGGTCCACGTTCCATCGCTTCGAGCTCATGCACGGCAACCAGGACACGTTCAAGGATATGCTTAAGGCCAGGTACGCAGATGTCGCCGAATTTACCTGTAACTGTGATGTAACACGATGA
PROTEIN sequence
Length: 131
MKVLARACAAVPAATRLEMYLVYLVKASEAYGAVRTRDIFDQALQALPDSAVPLIGARYAALERALGEIDRARGVYKYCAQYCDPKTEERFWSTFHRFELMHGNQDTFKDMLKARYADVAEFTCNCDVTR*