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scnpilot_p_inoc_scaffold_27230_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(428..961)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheW n=1 Tax=Variovorax paradoxus RepID=UPI0003643B3C similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 177.0
  • Bit_score: 344
  • Evalue 8.30e-92
  • rbh
Variovorax paradoxus strain MEDvA23 contig_84, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21911.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 177.0
  • Bit_score: 351
  • Evalue 7.30e-94
chew protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 177.0
  • Bit_score: 342
  • Evalue 6.80e-92

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGCGAATCGCGATGCTCTGAGAGCCTTCCAGTCCCGGCTGGCGAGCCGCCTGCAGGCAGCTCGCACCACCGGCGTGGCCGCCACGTGGCTGGCGGTCGAGGCGGGCGAGGGCAAGTACCTTTTTCCGCTGGGACATGCCGGCGAAATCTTTCCCTGGACGCCGCCGCAGCCCGTGCCCTACACGGAGCCGTGGTTCCTGGGCGTGGCCAACCTGCGCGGCGGCCTCTACGGCGTGGTGCAGCTGTCGGCGTTCGCCTCCGGCGGCCCGGGCACGCAGGCCACCACCGAGGCGGCGCGCATCCAGTCGCGGCTCGTTGCTTTCAACGAGCTGCTCGAAGTCAACTGCGCATTGCTGGTCGACCGACTGGCGGGGTTGCGGGGCGCGGAAGCCTTCACTGCCTCCGAGCCACCCGGCGCAGAAGCACCTGCCTGGCACGGGCATCTGTACACCGACGCGGCAGGAGAGCGCTGGCAGGAAGTCAACCTGCAGGCGCTTTCGCAGCAACCCCAGTTTTTGAGTATTGGTGCGTAG
PROTEIN sequence
Length: 178
MANRDALRAFQSRLASRLQAARTTGVAATWLAVEAGEGKYLFPLGHAGEIFPWTPPQPVPYTEPWFLGVANLRGGLYGVVQLSAFASGGPGTQATTEAARIQSRLVAFNELLEVNCALLVDRLAGLRGAEAFTASEPPGAEAPAWHGHLYTDAAGERWQEVNLQALSQQPQFLSIGA*