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scnpilot_p_inoc_scaffold_30536_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 359..1777

Top 3 Functional Annotations

Value Algorithm Source
Chemotaxis protein MotD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 473.0
  • Bit_score: 730
  • Evalue 1.10e-207
  • rbh
Chemotaxis protein MotD {ECO:0000313|EMBL:EYR80386.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 473.0
  • Bit_score: 729
  • Evalue 3.40e-207
motD; Chemotaxis protein motD Motility protein D similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 493.0
  • Bit_score: 236
  • Evalue 1.40e-59

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
TTGAGCACCATCGGTAGCGGAGTTCTGGGTGTCGTGCAGGGGCAGGCACCGGGGAAGGGTAAAGCCGGCCACGGCCAAACCGCCGGCGCTTCGGAGGAGGGCGGTTTCTCTATCGCTGTCGCCAGCCTCTCCGGGCGCGAAGGTGACGGAGGCCGCAAGGGAGCACGGCTGTCGATTTCCGAAACGGCTGCCCGCAGCGAGCACGAAAGCGCAGAAACGGATCAGGCACGGGTAAAGCTAGGGCGTCGTGACGCCGCGGCATCGACAGAGGCTACCGCAAAGCGTCCGGCGGACGCCGCTGGTGAGGCCGACATGCCTTTCGACGAGAAGGCAGCTGCCGTTCTGGAGGCTGCCAGCCGGCAGGGGCGAAAGACATCGGGCGAGGTGCATGACGGCAAGACTGCCGCGCGCCATGGTGAAGAGACGGCTGGCGATGAGGACGCCCCGGCTGCGGACGCAACAGCACAGACTGCGGTGAAGGCCGAGACGGATGTCGGCAATCTTCTTGAAATGCTGGCGGCGCCGAACGCCATGCCCGTGAACGCGGTGGCCAGGGGCGGTATGCCGGGTGCCGTGGCAGACGGGAGGACACAGGTCGCCGGCAAGGGACCGGCCCGGGCCGAGGCCCGCGCCGAGGCTGCGGCCAAGGCCGATACTACCCTTGCGGCAGGCGCCGCGGATGCCGGCGACGTGCCGCAATCCGATGCCGACCAGCTCTTCCGGCTGATCCGCGCCGACGGCAAGGGGCGGGACCTCGACATGAGCTTGTCCGACAAAGGCGATCGCGCCACCTTCCGGGACGCCAATCCGACAGGCCCGAAGGGCGAAACGGTGGCCGTGATCGATGCGCGACGCTATATCGGTCTTGCGCAGACGGGCAATGCGGCGGCCGTGACGTCGGCGATCAGGCAGGACCCGCAATGGTCAGCCTCGCTGAGCGCCACCGGTGGGCTTAACCATTCGGAAGCCGCGGCCACCGGCAAGGTCGTCAATACGCTGAAGATCCAGATGAATCCGATCGAGCTTGGCCTTATAACAGCGACGTTGCGCTTGCATGGCGACGAGCTCGTCGTTTCGCTGCAGGTGGAGACGGGTGAGGCCTACCGCCAGCTCACCGATGATCAGGATGCCATCGTGCGCGCGCTGCGCGGGCAGGGCTTTGCCGTTGATCAGGTCAGCGTACAGCTCGCGCCGACCGACAGGAGCGCGAATGCGCAGCAGGGCGACAGCCAGAGCCAGCAGCAGCAGTTCTCCAACCAGCCACAGGCCCGCGAGGGGGGCAATGGCCGCCAGGGCGGCAATGGAGAGAGTGCAGGCAGTTTCGCACAGGAGGGAACATCCTATGAAGGCAACACGTCGGACAACGCTCCTGGCCTTGCTGGCGGTCAGCCTCAGCGCTCTGGCGGCGTCTATCTCTGA
PROTEIN sequence
Length: 473
LSTIGSGVLGVVQGQAPGKGKAGHGQTAGASEEGGFSIAVASLSGREGDGGRKGARLSISETAARSEHESAETDQARVKLGRRDAAASTEATAKRPADAAGEADMPFDEKAAAVLEAASRQGRKTSGEVHDGKTAARHGEETAGDEDAPAADATAQTAVKAETDVGNLLEMLAAPNAMPVNAVARGGMPGAVADGRTQVAGKGPARAEARAEAAAKADTTLAAGAADAGDVPQSDADQLFRLIRADGKGRDLDMSLSDKGDRATFRDANPTGPKGETVAVIDARRYIGLAQTGNAAAVTSAIRQDPQWSASLSATGGLNHSEAAATGKVVNTLKIQMNPIELGLITATLRLHGDELVVSLQVETGEAYRQLTDDQDAIVRALRGQGFAVDQVSVQLAPTDRSANAQQGDSQSQQQQFSNQPQAREGGNGRQGGNGESAGSFAQEGTSYEGNTSDNAPGLAGGQPQRSGGVYL*