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scnpilot_p_inoc_scaffold_34878_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..209

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 1.40e-23
Type VI secretion protein, VC_A0107 family {ECO:0000313|EMBL:EYR83979.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 2.00e-23
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 105
  • Evalue 5.40e-21

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
TCGATGAACGATTTCGAGCCGGGCGCGGTCGTCCAGCAGGTCGAGCCGCTGCGCAAGCTGCTCGCCGTGCGCAACAAGCTGCGCGACCTGATGTCCAAGGTCGATCGCTCCGAAGAGCTGGAAAGCCTGCTCGAAGAAGTATTGCAGAACACCGAAAAGCTGACGGCTCTGGCCGGCGAACTCGGCTCTGAAGAAAAGAAAGGCTGA
PROTEIN sequence
Length: 69
SMNDFEPGAVVQQVEPLRKLLAVRNKLRDLMSKVDRSEELESLLEEVLQNTEKLTALAGELGSEEKKG*