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scnpilot_p_inoc_scaffold_50136_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..890)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Kuenen_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 320.0
  • Bit_score: 128
  • Evalue 2.20e-26
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Methylomonas sp. MK1 RepID=UPI000364645A similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 269.0
  • Bit_score: 126
  • Evalue 4.50e-26
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 268.0
  • Bit_score: 121
  • Evalue 3.20e-25

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Taxonomy

CG_Kuenen_01 → Kuenenbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAAAAAACATATATTAAAATAAATTTAGTTTCACCTGAAAAAATTGAATCTTGGTCTAGACGAGAAATAAAAAAAAAATCATATTATTTTACAAGTGACGAAAATAATGTTCGTATTGCTAAATCTATTTTTTATACATATTCTTTTACTGGTGAAATTTTAGAAGATAATATTATTATTAAAGAAAATCAAAAGGAAATATTTAATAAATTGGGATTATTTTCAGAAAGTATTTTTGGTCCAATTTCTGATTTTAATTGTCAATGTAAAAAATTATCATATAAACATTATGAAATTTTTTTAGATTGTGAAACTTGTGGAATAAATTTAACTTTTTCAAAAGTTAGAAAATATCAAATGGGGCATATACCATTAGTTTTACCTTTTTTACATACTTGGTTTTTTTGGGGAAATATTAATATATTAAAAATTTTCTTTGATTTACCTTTTTTATCATTAAAAAATTTATTTTATTTTAATTTTGTAAAAAAAGAATATAATTACATTATACAATTATTTGATACATATTATAAATTGGTAATTGAATCTAAAATTCTTAATAATCAAAATGAAGAAATAAATAATTTAGTAAAAATAAAATTAAAAGAATTAAATGAATTTACAGATAAAATAAAAAATAAAAATAATTTTTTTAAAAAATCAATAAATGAAATTTTTTTTAATTTTTTAAATTCATTTGATATTTTTAAAGAATTAAATTTATTATTTGAAAAAATTAATAAAAATATTGAAAATATTGATTTTAATTTTTCTAATTATATTAAAAAATTTAGAATTTTAGAAAGTTTTTATTATACAAATACAAATCCCGCTTGGATTTTTTTAAAAAATATACCAGTAACCCCTCCAGAATTAAGACCTTAT
PROTEIN sequence
Length: 296
MKKTYIKINLVSPEKIESWSRREIKKKSYYFTSDENNVRIAKSIFYTYSFTGEILEDNIIIKENQKEIFNKLGLFSESIFGPISDFNCQCKKLSYKHYEIFLDCETCGINLTFSKVRKYQMGHIPLVLPFLHTWFFWGNINILKIFFDLPFLSLKNLFYFNFVKKEYNYIIQLFDTYYKLVIESKILNNQNEEINNLVKIKLKELNEFTDKIKNKNNFFKKSINEIFFNFLNSFDIFKELNLLFEKINKNIENIDFNFSNYIKKFRILESFYYTNTNPAWIFLKNIPVTPPELRPY