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scnpilot_p_inoc_scaffold_63457_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(670..1134)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDK3_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 138.0
  • Bit_score: 158
  • Evalue 4.30e-36
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CDM65463.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 140.0
  • Bit_score: 160
  • Evalue 2.70e-36
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 135.0
  • Bit_score: 158
  • Evalue 1.60e-36

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 465
CTCGGCGCGGACGATTACCTGACCAAGCCGTTCGGTATTGACGAACTGCTGGCCCGGATTCGGGTGGCCTTGCGGCGGAGCGCCAAGCTCAAAGAGAACTCGCGCAAAGAGGATTTGTTGGGCTTTAACGACGAGGATTTGCAGATTGATTTCGCCCGCCGCCTGGTCACTTTCCAGGGCCAGGAAGTAAAACTCACTCCCAAACAGTACGACCTCCTGCGCTACCTGGCCCAGAACGCCGGGCGGGTCATCACCCACCGGGCCGCCCTGGTCAACGTCTGGGGACCGGAGTACGGGCAGGAAAGCCAGTATTTGCACGTCTTTATCGGCCAGTTGCGCCAGAAAATCGAGGTTAACCCGGCCCACCCCCGTCACATCATCACCGAGCCGGGCGTGGGGTACCGCTTCAAAGAAGCCGCCTGCCCCTGTAATATAACCCCTTTTTCCTATTTCGAATTGCCTTGA
PROTEIN sequence
Length: 155
LGADDYLTKPFGIDELLARIRVALRRSAKLKENSRKEDLLGFNDEDLQIDFARRLVTFQGQEVKLTPKQYDLLRYLAQNAGRVITHRAALVNVWGPEYGQESQYLHVFIGQLRQKIEVNPAHPRHIITEPGVGYRFKEAACPCNITPFSYFELP*