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scnpilot_p_inoc_scaffold_65726_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(782..1102)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 104.0
  • Bit_score: 172
  • Evalue 7.30e-41
Choline dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUZ4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 104.0
  • Bit_score: 172
  • Evalue 2.60e-40
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29000.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 104.0
  • Bit_score: 180
  • Evalue 1.30e-42

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATCTATCACCCGGTGGGCACCTGCAAGATGGGCACCGACGCCATGGCCGTGGTCGACGCGAAGCTGCGCGTTCACGGCATCGCGAACCTGCGCGTGGTCGATGCCTCGGTGATGCCGACGCTGATCGGCGGCAACACCAATGCGCCGACGATCATGATTGCCGAACGCGCCGCCGACTGGATGCGCGGGCCGATCACCTTCGACCGCGCGGTGCAGGATGCTAGGGAGCCCGCGAAGAGCCCCGCACCACCAGCTCGCCAGGCAGCAGCAGCTGGCGCGGCGCCTCTTCCAGCCCCCGCAGCCGCTCGATCAGACACGTAG
PROTEIN sequence
Length: 107
IYHPVGTCKMGTDAMAVVDAKLRVHGIANLRVVDASVMPTLIGGNTNAPTIMIAERAADWMRGPITFDRAVQDAREPAKSPAPPARQAAAAGAAPLPAPAAARSDT*