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scnpilot_cont_500_p_scaffold_1026

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1026_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1484
DNA (1482bp) protein (494aa)
UPI0003CF5E5B related cluster n=1 Tax=unknown RepID=UPI0003CF5E5B rbh
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:CDX24765.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sou
family 5 extracellular solute-binding protein
scnpilot_cont_500_p_scaffold_1026_2
unknown

Not on your lists

comp(1605..1769)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1026_3
unknown

Not on your lists

2060..2764
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1026_4
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2761..3978
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q1B0_9ZZZZ
Contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIX11866.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
scnpilot_cont_500_p_scaffold_1026_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4125..5930)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6R5_9RHIZ rbh
GTP-binding protein LepA rbh
scnpilot_cont_500_p_scaffold_1026_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6248..7321
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003770476 rbh
Uncharacterized protein {ECO:0000313|EMBL:AID33487.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
hypothetical protein
scnpilot_cont_500_p_scaffold_1026_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7797..8498
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGQ9_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV09995.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
scnpilot_cont_500_p_scaffold_1026_8
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8580..8825
DNA (246bp) protein (82aa)
UPI0003CFE61C related cluster n=1 Tax=unknown RepID=UPI0003CFE61C
Uncharacterized protein {ECO:0000313|EMBL:ESZ50738.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1026_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8922..9662
DNA (741bp) protein (247aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YK65_9RHIZ rbh
methionine-S-sulfoxide reductase rbh
scnpilot_cont_500_p_scaffold_1026_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10129..11568)
DNA (1440bp) protein (480aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFX3_AFIFE
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EKS29372.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
RND efflux system, outer membrane lipoprotein, NodT
scnpilot_cont_500_p_scaffold_1026_11
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11593..14871)
DNA (3279bp) protein (1093aa)
nodulation protein n=1 Tax=Rhizobium loti RepID=UPI0003653A02 rbh
Multidrug resistance protein MdtC {ECO:0000313|EMBL:AID32201.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
acriflavin resistance protein
scnpilot_cont_500_p_scaffold_1026_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14868..17984)
DNA (3117bp) protein (1039aa)
multidrug transporter n=1 Tax=Rhizobium loti RepID=UPI00037852BA rbh
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:AID32200.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
acriflavin resistance protein
scnpilot_cont_500_p_scaffold_1026_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17981..19423)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000380BF1F rbh
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE64332.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
scnpilot_cont_500_p_scaffold_1026_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19666..20592
DNA (927bp) protein (309aa)
Putative ABC transporter (ATP binding protein) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FE75_9RHIZ rbh
Putative transporter subunit: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX25132.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
ABC-type multidrug transport system, ATPase component
scnpilot_cont_500_p_scaffold_1026_15
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20589..21350
DNA (762bp) protein (254aa)
sugar ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI000377DA89 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
permease, ABC-2-type transport system rbh
scnpilot_cont_500_p_scaffold_1026_16
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21461..23452)
DNA (1992bp) protein (664aa)
UPI0003CDF4CB related cluster n=1 Tax=unknown RepID=UPI0003CDF4CB rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ESY62992.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
hypothetical protein
scnpilot_cont_500_p_scaffold_1026_17
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23799..23951
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FND2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX80402.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
Displaying 17 items

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