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scnpilot_p_inoc_scaffold_292_87

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 89223..89768

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7718689 bin=BACIGN_2 species=Jonesia denitrificans genus=Jonesia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 363
  • Evalue 1.00e-97
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 158.0
  • Bit_score: 128
  • Evalue 1.00e-26
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 179.0
  • Bit_score: 81
  • Evalue 2.90e-13

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Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 546
ATGAACGAGCTGTATCGTCGGCATGCACAGCGATTGTACACATACTGCCGCAAGATGACGGGCGGGGAACACGAGGCATCGGATCTTTTCCAGGATGCATGGTTGAAGCTCCTGCAGGTACTCGAACGGAAGGACGTCGTACCGGATCATGTCGGTGCCTATCTCCTGCGCGTGGCGCGCAACCAGATCCTGAATGCGAAGCGGTCGGACGTCCGGCACGTGACACTCGAAGACGTGGAACTGCTCATGCGGGACAGACCGTACGAGCAGCGCGAAGCCCTCGTGCTGCTCGACGGGGCTCTCGAGCTACTGGATACTACCCTTCGCGAAGCCTTCGTTCTGTATGAGATGGAAGGCCTGACCTACGACGAGATGATGGCGATCACGGGCGAGACGATGTCCACGCTCAAGACGAGGGTATGGCGCGCTCGCACACGTCTGCGCGAGATCCTGCGCCCGGTACTTGGCGACGTTCGTGAGATGTTCGGTCACGACGATGCGCCGACACCAATCACCAAGGCGAAGAACGACGATGAAACAACGTGA
PROTEIN sequence
Length: 182
MNELYRRHAQRLYTYCRKMTGGEHEASDLFQDAWLKLLQVLERKDVVPDHVGAYLLRVARNQILNAKRSDVRHVTLEDVELLMRDRPYEQREALVLLDGALELLDTTLREAFVLYEMEGLTYDEMMAITGETMSTLKTRVWRARTRLREILRPVLGDVREMFGHDDAPTPITKAKNDDETT*