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scnpilot_p_inoc_scaffold_1800_5

Organism: SCNpilot_P_inoc_Thiobacillus_core_68_1.2k_partial

partial RP 1 / 55 BSCG 3 / 51 ASCG 1 / 38
Location: comp(5472..7043)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit id=1347805 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 527.0
  • Bit_score: 882
  • Evalue 1.90e-253
  • rbh
RND family efflux transporter MFP subunit Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 526.0
  • Bit_score: 882
  • Evalue 2.70e-253
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 514.0
  • Bit_score: 431
  • Evalue 3.30e-118

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
ATGAACAAGACCCTGATTAGATCTATTGGCGCATCCCTTTGCGCCGCCCTCTTTCTGATGGGCTGCAGCCGTGACCACGAACATGCCGAAGACGGCAGCCATCCCCCTGCGGCGGAAGCTGAGGCCGCACACGGCCACGGCGCTGGCGGTGAAAAGCTCACCCACTTCAGCGACCGTACCGAACTGTTCGTCGAGTTCCCGCGGCTGGTGGTCGGCGAGAAATCCGCCTTTGCCGCGCACCTGACCACGCTGGCCGACTTCAAGGCACTCACCGGCGGCAAGGTCACGGTCCGGCTGTCGGGCGGCGGCCAGCCCGACGAGGTGTTCAGCGTGGAAGGCGCCAGCCAGCCCGGCATCTTCCGCCCCGAGGCCATGCCGAAGCATGCGGGGGATCGCGATCTGACGATCGAGGTCGCCACCCCTGAGTTCAGCGCGACGCATGAACTCGGTCCGTTCACGGTGTATCCCGACCGCAAGGCCGCCGAGGCCGAGCCGGCTCCGCACGACGACGAAGGCATCGGCTTCACCAAGGAACAGCAGTGGAAAGTCGACTTCGCCACCGCCGAGGTGGTGACGCGTCCGATCCGCACGGCAGTCAACGCGACCGGTGTCTTGCGCGCCCGCCCGGATGGCGAGGCCCAGCTCACTGCCGCGGCAGTGGGACAGGTGCAGTCCGCAGGCACCTTCCCGCGTCTGGGCCAGCAGGTGAAAAAAGGCGAACTGCTCGCCTATCTGGTGCCGCGCATGGGCGGCGAAACCGATCTCGCCACCCTGCGGGCGGCCGCGAACAAGGCTCAGGTTGAGCTCGATCTCGCCCAGCAAGAGCTGGCACGCATGGAAACGCTTTTCCGTGAGGAAGCGGTGCCGGAGAAACGGGTGCTCGCTGCACGTGCTGCCGTAGCCTTGGCACGCGCCGAACTGACGGCCGCGCAGCAGCGGCTGGGTCAATACGGTGGCGCCGGTGGCGGCATCCCCGTCCGTGCGCCGGTGTCCGGCACGCTGGCAGACGTGCGTGTGTCGCCCGGGGCGTTCGCCCAGGAGGGCACGCTGCTGTTCCACATCGCCGACCGCAGCAAGCTGTGGCTGGAACTGCGCGTTCCCGAATCCGACGCGGCGAGGCTGGCCAACCCGACTGGCGCCGCCTTCCGCGTGGCGGGCGACGAACGCAGCATCGAGATCATCCCCGGCAAGAGCGGACGGCTGATCGCCGTCGGCGGTGTAGTGGATGCCACCACCCGCACCGTGCCGGTGGTGTTCGAGTTCACCGCACCCGACCGGAATCTCCCCATCGGCATGGCGGTGCAGGCGCAGGTGTTCGCCGGCAGCGTGCGCGAAGCGGTGGCGATTCCGGCGTCGAGCGTGCTCGACGAGGGCGGCATGAGCGTGGTGTTCGTGATGATCGGCGGCGAATCCTTCGAGCGGCGCCAGGTGCGCCTGGGCGCACGCGAAGGCGACTGGGTCGAAGTGCTGGAGGGTTTGACCCCAGGCAGCCGCGTCGTCTCGCGCGGCGCCTATCTGGTCAAGCTGGCGTCCACCGGCACCGCGCAAATTGGCCACGGCCATGCGCACTGA
PROTEIN sequence
Length: 524
MNKTLIRSIGASLCAALFLMGCSRDHEHAEDGSHPPAAEAEAAHGHGAGGEKLTHFSDRTELFVEFPRLVVGEKSAFAAHLTTLADFKALTGGKVTVRLSGGGQPDEVFSVEGASQPGIFRPEAMPKHAGDRDLTIEVATPEFSATHELGPFTVYPDRKAAEAEPAPHDDEGIGFTKEQQWKVDFATAEVVTRPIRTAVNATGVLRARPDGEAQLTAAAVGQVQSAGTFPRLGQQVKKGELLAYLVPRMGGETDLATLRAAANKAQVELDLAQQELARMETLFREEAVPEKRVLAARAAVALARAELTAAQQRLGQYGGAGGGIPVRAPVSGTLADVRVSPGAFAQEGTLLFHIADRSKLWLELRVPESDAARLANPTGAAFRVAGDERSIEIIPGKSGRLIAVGGVVDATTRTVPVVFEFTAPDRNLPIGMAVQAQVFAGSVREAVAIPASSVLDEGGMSVVFVMIGGESFERRQVRLGAREGDWVEVLEGLTPGSRVVSRGAYLVKLASTGTAQIGHGHAH*