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scnpilot_p_inoc_scaffold_95_188

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 193882..194358

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12497232 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 304
  • Evalue 6.50e-80
  • rbh
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 285
  • Evalue 6.80e-75
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 285
  • Evalue 3.40e-74

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGAACAAGTTTCCACTTACCGTGATTGGCGCCGAGAAACTGCGCGTCGAATTGCAGCATCTGAAGTCGGTCGAGCGGCCGTCCGTGATCCAGGCAATTGCCGAGGCGCGTGCGCAGGGCGACCTGTCGGAAAACGCCGAGTACGATGCTGCCAAGGAAAAACAGGGCTTCATCGAGGGCCGCATCGCCGAACTCGAAGGCAAGCTGTCGAATGCGCAGATCATCGACCCGACCACGCTCGACGCCGACGGCCGTATCGTGTTTGCAGCAACGGTCGAGCTGGAGGATATCGAATCGGGCGACACCGTCACCTATCAGATCGTCGGTGACGACGAGGCCGATATCAAGTCGGGCAAGATCTCCGTATCCTCGCCCATTGCGCGGGCCCTGATCGGAAAATATGCCGGCGATGCCGTCGATGTGCAGGCGCCCGGCGGCGTGCGGCAGTACGAAGTCCTTGACGTACGCTACGTCTGA
PROTEIN sequence
Length: 159
VNKFPLTVIGAEKLRVELQHLKSVERPSVIQAIAEARAQGDLSENAEYDAAKEKQGFIEGRIAELEGKLSNAQIIDPTTLDADGRIVFAATVELEDIESGDTVTYQIVGDDEADIKSGKISVSSPIARALIGKYAGDAVDVQAPGGVRQYEVLDVRYV*