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scnpilot_p_inoc_scaffold_819_29

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(27504..28133)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12498467 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 418
  • Evalue 5.40e-114
  • rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 209.0
  • Bit_score: 388
  • Evalue 4.90e-105
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 209.0
  • Bit_score: 380
  • Evalue 3.50e-103

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTAATCTCGATCCCAAATGCCGCCAGTGCCGTCGCGAAGGCGAGAAGCTTTTCCTCAAAGGCGAAAAATGCTTCACCGACAAGTGTGCCATCGAGCGCCGCGCCTATGCGCCCGGCCAGCATGGCCAGAAGAGCGGCGCCCGCTTGTCCGACTACGGTGTGCATCTGCGTGAAAAGCAGAAAATCCGCCGCATCTATGGTGTACTCGAAGGCCAGTTCCGCCTGGTGTACAAGGAAGCGGAACGCAGCAAGGGCGTGACCGGCGAAAAGCTGCTGTCCATGCTGGAATCCCGCCTGGATTCGGTTTGTTACCGCATGGGTTTTGGCGCTTCGCGTACCGAGGCGCGCCAGGTCGTCCGGCACAATGGCATTCTGGTCAATGGCCGTCGCGTAAACATCCCTTCTTACCAGGTTCGTGCCGGTGACGTGGTCGAGGTGTCCGACAAGGCCAAGAGCCATCTGCGCATCAAGGCCTCCGCCGAGGCGACTGCCGCACGGGGCTATCCCGAGTGGATCGAAGCCGATGCCAAAGCCCTCAAAGGCACCTATAAAGCCGTGCCCCAGCGCTCGGATCTGCCCTCGACCATCAACGAATCGCTGGTCGTCGAACTGTACTCCAAGTAA
PROTEIN sequence
Length: 210
MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSDYGVHLREKQKIRRIYGVLEGQFRLVYKEAERSKGVTGEKLLSMLESRLDSVCYRMGFGASRTEARQVVRHNGILVNGRRVNIPSYQVRAGDVVEVSDKAKSHLRIKASAEATAARGYPEWIEADAKALKGTYKAVPQRSDLPSTINESLVVELYSK*