ggKbase home page

scnpilot_p_inoc_scaffold_274_84

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 83101..84501

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZK9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 443.0
  • Bit_score: 809
  • Evalue 1.80e-231
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EAQ02490.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocean similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 443.0
  • Bit_score: 809
  • Evalue 2.60e-231
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 216.0
  • Bit_score: 161
  • Evalue 5.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanicola batsensis → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGACAGCCACAGGGCCAACAAGTATCGACAATGGATGGCACGACAGAGTGAAGATACCAAGATAGTGTATGACGATCTAAGCAAGTCGGAGAGGACCCGCGAAGCCATACTCGCTGCGGCCGCGCGACTTTTTCGGTATCAAGGTTATCATGCAACGACGATGCGCGACATCGCGCAGGAAGCCCGCATTGAGGCCGGCAGCATTTATTACCATTTTCAATCCAAGGACCAAATTCTGAGCGAAGTTCTCGAAATTGGCGTCCGTCAACTATATCAGACGGTCAGTGAAATCGTTCGGCCGGCACCGACAAGTTCGGAGGATTTTCGCAAGACTTTCGGAACCCTGATTGAAACACACCTTACCTATCTGTTGACCGACAGTGACTTTACGTCAGCTAATATTCGGAACTATCCGATGTTGTCGGACGAAACACGCGCCCCGCATCGCGAATTGCGTGCATCATATGCAGGTGCCTGGGGCAAATTCCTGAATGACGCCAAACGCGCCGGCCACCTTCGAAGTGACATATCCACTGCTGTGATCCGCCAGTTCATCCTGAGTGCCATGAACTGGACCGTGGAATGGTACGATGTCGACAAGTATCCGGTGCGCATCCTCGCGGAACGAATGAGTAAGCTGATACTTGACGGAATGTGTTTGCATGACAGTGCTGATACAGAAGGCTTGAAGCTGTGTCCCGCCACTCCCGTCAAAACTCCGGACCCTGGCAGCAAGGCGGCTAAGACCCGTGCAGAAATACTAACGGCCGCAGCGCGCGTTCTGAGGGACAATGGCTACAAGGCGACGACTCTGAGAAAGGTCGCGGACAATGCTGGCTTGAAAGCGGGCAGCGTCTATTACCACTTCAATTCCAAGGACGCGATCGTTGACGAAGTGCTGAACGCCGGACTAAAGGACCTGCTATCAGGTGTCGAAGCCGCCGTTCGGCAATTCGATGCCCCCTACGATCATCACGCCAGGATAGCGACCGCAATCTGGACGCACCTGGATTTCCTCTTCAAGGCAAGCGAATTTACCTCGGCGAACATCCGAAGTTATGGAATGCTCCCCAATCATTTCAGGGAGAGGCACAGGGGTATTCGCCATGAGTATGGAAAACTCTGGGATTGGATACTCCGTGAAGCTCAGGACGACGGTGCCATACGGTCGGATATCAAGATCGTCCCCTTGCGCCAGGTGATGTTGGGTGCCTTAAACTGGACGGTGGAATGGTTCGACCCGAACAAGGCAGGAGTGGAAGGATATCTATCACTGCCTGAATTCTCCAGCATGCTCATCAATCTGTTACTGGAAGGCATTTGTAACCGGGAAGCGGCCCCGTCCACAGGACAAGGTAGCCCTGAAAGCGGTTGCCCCGGTCAGACCAGAAGGAAGTGA
PROTEIN sequence
Length: 467
MDSHRANKYRQWMARQSEDTKIVYDDLSKSERTREAILAAAARLFRYQGYHATTMRDIAQEARIEAGSIYYHFQSKDQILSEVLEIGVRQLYQTVSEIVRPAPTSSEDFRKTFGTLIETHLTYLLTDSDFTSANIRNYPMLSDETRAPHRELRASYAGAWGKFLNDAKRAGHLRSDISTAVIRQFILSAMNWTVEWYDVDKYPVRILAERMSKLILDGMCLHDSADTEGLKLCPATPVKTPDPGSKAAKTRAEILTAAARVLRDNGYKATTLRKVADNAGLKAGSVYYHFNSKDAIVDEVLNAGLKDLLSGVEAAVRQFDAPYDHHARIATAIWTHLDFLFKASEFTSANIRSYGMLPNHFRERHRGIRHEYGKLWDWILREAQDDGAIRSDIKIVPLRQVMLGALNWTVEWFDPNKAGVEGYLSLPEFSSMLINLLLEGICNREAAPSTGQGSPESGCPGQTRRK*