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scnpilot_p_inoc_scaffold_274_99

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 99042..99671

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZJ2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 209.0
  • Bit_score: 333
  • Evalue 1.30e-88
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM47030.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocea similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 209.0
  • Bit_score: 388
  • Evalue 4.90e-105
bacterial regulatory s, tetR family protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 203.0
  • Bit_score: 181
  • Evalue 2.40e-43

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Taxonomy

Pseudooceanicola atlanticus → Pseudooceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCACAAAGCACTGCAAGCAAAGTCAACGAGACATCGCGCAGCGCGGTCGGACGGGACGGGGTGCTGGACATTGCCGCGCGGCTTTTCCGCGAACAAGGCTACGGGTCCGTTTCGCTCCGAAAAATTGCCGAGGCCGCCGGGATCAAGGCGGGTAGCATATACTATCATTTCGGTTCCAAGGACGAGATCGTCGCGGCCGTTCTTGATGCAGGGATTCGGGTCGTTCACGCGAGTATGAGAGACGCCATCACCGACCTGCCAGCCGATACCGATGGCGAAACGATCCTGCGCTCTGCGATCCGGGCGCATTTGCGCGCGCTTCTTGATGTGAGCGATTATACATCGGCGAATGTGCGTATTTTCGGGCAGGTGCCGCAATCCGTCCGGGATGCCAACTTGCCCACGCGCAGGGCCTATGAGGCAGAGTGGGACAGTCTTCTGTCCCAGCTTAAGAAAGATGGCACGCTGAAGCAAGACGTCGATATCCGTCGCCTGCGCCTGATGCTGATCGGTACATTGAACGCCACGCTCGATTGGTTCGACCCGGACCGCGGTAGCGCCGATGCGTTGTCACGCACCTATGCCGATGTGTTCCTCAACGGGATACTCCAAAGACAGGATACCTGA
PROTEIN sequence
Length: 210
MAQSTASKVNETSRSAVGRDGVLDIAARLFREQGYGSVSLRKIAEAAGIKAGSIYYHFGSKDEIVAAVLDAGIRVVHASMRDAITDLPADTDGETILRSAIRAHLRALLDVSDYTSANVRIFGQVPQSVRDANLPTRRAYEAEWDSLLSQLKKDGTLKQDVDIRRLRLMLIGTLNATLDWFDPDRGSADALSRTYADVFLNGILQRQDT*