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scnpilot_p_inoc_scaffold_12_125

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 173565..174578

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54-dependent transcriptional activator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 324.0
  • Bit_score: 381
  • Evalue 1.20e-102
  • rbh
Sigma 54-dependent transcriptional activator {ECO:0000313|EMBL:EIL92421.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 324.0
  • Bit_score: 381
  • Evalue 1.60e-102
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 325.0
  • Bit_score: 378
  • Evalue 2.80e-102

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGCCGACGTGGACGACCTGATGATCGGCACATCGGACAGTCTCGAAGCCGCCGTGCGGGTATTGCGGCGCTACGCCGACTGCGACGCGCCGGTGCTGATCGAAGGCGAGACCGGTACCGGCAAGGAACTCGCGGCGCGGCGCATCCACTACGGCGGCGCGCGGCGCGGACGTCCCTTCGTTCCGGTCAACTGCGGTGCGCTGCCGGAAACGCTGATCGAAAGCGAACTGTTCGGCCATCGGCGCGGCGCTTTCACCGACGCGCGCGTATCGCGCGCAGGCCTGGTCGATCATGCCCGCGGCGGCACGCTGTTCCTCGACGAGGTCGACGCGCTGTCGGCGAAAGGACAGGTGACCTTGCTGCGCTTCCTGCAGGACCAGCGCTACCGGCCGGTCGGCGAAAGCGAATCCATGCAGGCCGACGTGCGCGTCGTCGCGGCCACCAATGCGTCGATCGAGGCGCTCGTGCGCGAAGGGCGCTTCCGGCATGACCTCTACTACCGGTTGAGTCCCCTGTGCGTGCGTCTGCCGCCGCTGCGCGACCGCGGCGGCGACGTGGCGCTGCTCGCGCGGCACTTTCTCGGCCAGGCCGCGCGCCGCATGGGCGCGGCGGCCAAGTGCTGGTCCGGCGAGGCGCTCGCGCTGTTGCAGGCCCATGCCTGGCCCGGCAATGTGCGCGAACTGGAGAACGTGGCCCTGCGTGCATTCCTGCTTGCCGCCGGCAGCGAGGTCGGCGCGGCCGAGCTCGCTGCCGCGCTGCCGGCACTGACCTGCGCGCGGGCCGCGCCGCCGGCCGAGGATGCGACAGGCGCATCCTTCACCCAGGCCAAGGCGCATGCGATCGCGTCGTTCGAGCGTAATTACCTGATAGAACTGATGCGCCGCTGCAGCGGCAACGTCACCCAGGCTGCGACCCTGTGCCGCACCGAGCGGCGTCAACTGGGCAAGCTGCTGAAGAAGCACGGCCTGGCCGGCGAAACGTTCCGCGACTCCGGCTTGCGCGCACCGGTATAG
PROTEIN sequence
Length: 338
MADVDDLMIGTSDSLEAAVRVLRRYADCDAPVLIEGETGTGKELAARRIHYGGARRGRPFVPVNCGALPETLIESELFGHRRGAFTDARVSRAGLVDHARGGTLFLDEVDALSAKGQVTLLRFLQDQRYRPVGESESMQADVRVVAATNASIEALVREGRFRHDLYYRLSPLCVRLPPLRDRGGDVALLARHFLGQAARRMGAAAKCWSGEALALLQAHAWPGNVRELENVALRAFLLAAGSEVGAAELAAALPALTCARAAPPAEDATGASFTQAKAHAIASFERNYLIELMRRCSGNVTQAATLCRTERRQLGKLLKKHGLAGETFRDSGLRAPV*