ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_p_inoc_scaffold_48_434

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(537486..539750)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5DE6B similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 755.0
  • Bit_score: 1294
  • Evalue 0.0
  • rbh
MFS transporter {ECO:0000313|EMBL:KFN51671.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1 similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 752.0
  • Bit_score: 1294
  • Evalue 0.0
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 753.0
  • Bit_score: 1227
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Arenimonas malthae → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2265
ATGTCCGCCGTTGCACCGATTCCCGCCCGCCACAAAAGCCTCAACCGCGCCGAAGTCTGCGATCAGAATTTCCTCGAGTTCGTGCGCGACTGGGGCGGCCAGGCGCGCAAGCGTCCGGCCTCCGACGAGCCGGTGCTGCCGGGCAGCCTGTGCACTGCGGCCGATTTCGCCGCGCTGTTCGAGTCGCAGCTGATCAGCCGTCACCTCGATCTCATGGCGCGGGTGCTGCGCGTCAAGCAGAAGGTGTTCTACACGATCGGTTCCTCGGGCCACGAAGGCAATGCGATGGTCGCGCGCCTGACCCGGCACACCGATCCGGCGTTCCTGCACTACCGCTCCGGCGGCTTCATGGCCGAGCGCTTCCGCAAGCTGCAGGGCATGGATCCGATCATGGATTCGGCGCTGTCCTTCGCAGCAAGCAAGGACGACCCGGCGTCCGGCGGACGCCACAAGGTCTGGGGCTCCAAGCCGCTCTGGGTGCTGCCGCAGACGTCCACGATCGCCTCGCATCTGCCCAAGGCGCTCGGCACGGCCGTGGCGATCGAACAGGCGCGGCGCATAGGCCATCAGCTGCCGGTGCCGGAAGACTCGATCACGATATGTTCCTTCGGCGACGCCTCGGCCAATCACGCGACCGCGCAGACCGCGTTCAATGCGGCGCAGTGGACGGCCTACCAGAAATTGCCGGCGCCCGTGCTGTTCGTCTGCGAGGACAACGGTATCGGCATTTCGGTCAAGACGCCGACCGACTGGATCGGCGCGAGCTTCAGCGGCCGCCGCGACCTCGACTATTTCTTCGCCAACGGTCTGGATCTGGCCGAAGGCTACGAGCAGGTCGCGCGCGCGGTGTATCACTGCCGTACGACGCGCCGGCCGACCTTCCTGCACCTGCGCACCACGCGCATCATGGGCCACGCCGGCACCGACTTCGAGATCGAATGGCGCAGCGTCGAAGAACTCATGGCCGTCGAAGCGACCGATCCGCTGCTGCGTTCGGCCGCCATCGCGCTGGAATCGGGCCTCTACACCAAGGACAGCCTGCTCGCGAAATACGAGTCGGTGCGCCAGAAATGCTTCGCCGCGGCCGAGGAAGCCGATCGCCGGCCCAAGCTCACCGATCTGGCCGACGTGATCGCGCCGCTCGCGCCGTATCACCCGAACCAGGTCAACGTCGAGGCGCGCCGCGCCGATTTCGCCGACAAGCGCCTGGCCGTGTTCGGCGGCGAGGACAAGCTGCCGGAGAAGCAGGCGCCGCGCCATCTGGCCATCCAGATCAACAATGCGCTGCACGACCTGTTCTGCAAATACCCCGAGACCCTGCTGTTCGGCGAGGACGTCGCGCAGAAGGGCGGCGTCTACACGGTGACCAAGGGCCTGCACAAGGCGTTCAAGAACAACCGCGTGTTCAACACTCTGCTCGACGAAACCATGATCCTCGGCCTGGCCCAGGGCTATGCCAACATGGGCATGCTGCCGCTGCCGGAGATCCAGTACCTCGCCTATTTCCACAATGCCTGCGACCAGATCCGCGGCGAAGCCTGCTCGCTGCAGTTCTTCTCCAACGGCCAATACCGCAATCCGATGGTCATGCGCATCGCTTCGCTGGGCTACCAGAAGGGATTCGGCGGCCATTTCCACAACGACACCTCGATCACTGCGCTGCGCGACATCCCGGGCCTCGTCGTCGGCTGTCCGAGCCGTGGCGACGATGCGGCGATGATGCTGCGCACCCTGACCGCGCTGGCCAAGGTCGACGGCCGCGTCTGCGCCTTCCTCGAGCCGATCGCACTGTACATGACCAAGGATCTCTATGAGGCCGGCGACGGCCAGTGGCAGACCAGCTATCCGGCGCCCGACCAGCACATTCCGCTCGGCGAGGAGCGCGTCTACGAGCCGGCCGCGAAGGATCTCGTGATCTTCTGCTACGGCAATACCGTGCCGATGAGCCTGCGCGCGGCGCGCGCGCTGGAAAAGAGCCGCGGCTGGAAGACCCGCGTCGTCGACCTGCGCTGGCTGCAGCCGCTGAACGAGGCCGCGATCGCGCGCCATGCCGGCGACTGCGCGCGCATAGTCGTCGCTGACGAGGGCCGCCGCAGCGCCGGTGTCGGCGAAGGCATCATCACGGCGGTCGTCGAATCCGGCCACGGCGCCAGGCCGCTCAAGCGCGTCGTCGGCGTCGATACCTACACGCCGCTGGCCGGCGCGGCGTTTCTCGTGCTGCCCTCGGACGAGGACATCATCGCCGCGGCGGAAAGCCTGGCCTGA
PROTEIN sequence
Length: 755
MSAVAPIPARHKSLNRAEVCDQNFLEFVRDWGGQARKRPASDEPVLPGSLCTAADFAALFESQLISRHLDLMARVLRVKQKVFYTIGSSGHEGNAMVARLTRHTDPAFLHYRSGGFMAERFRKLQGMDPIMDSALSFAASKDDPASGGRHKVWGSKPLWVLPQTSTIASHLPKALGTAVAIEQARRIGHQLPVPEDSITICSFGDASANHATAQTAFNAAQWTAYQKLPAPVLFVCEDNGIGISVKTPTDWIGASFSGRRDLDYFFANGLDLAEGYEQVARAVYHCRTTRRPTFLHLRTTRIMGHAGTDFEIEWRSVEELMAVEATDPLLRSAAIALESGLYTKDSLLAKYESVRQKCFAAAEEADRRPKLTDLADVIAPLAPYHPNQVNVEARRADFADKRLAVFGGEDKLPEKQAPRHLAIQINNALHDLFCKYPETLLFGEDVAQKGGVYTVTKGLHKAFKNNRVFNTLLDETMILGLAQGYANMGMLPLPEIQYLAYFHNACDQIRGEACSLQFFSNGQYRNPMVMRIASLGYQKGFGGHFHNDTSITALRDIPGLVVGCPSRGDDAAMMLRTLTALAKVDGRVCAFLEPIALYMTKDLYEAGDGQWQTSYPAPDQHIPLGEERVYEPAAKDLVIFCYGNTVPMSLRAARALEKSRGWKTRVVDLRWLQPLNEAAIARHAGDCARIVVADEGRRSAGVGEGIITAVVESGHGARPLKRVVGVDTYTPLAGAAFLVLPSDEDIIAAAESLA*