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scnpilot_p_inoc_scaffold_48_499

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 635886..636536

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 180.0
  • Bit_score: 168
  • Evalue 1.10e-38
RNA polymerase, sigma-24 subunit, ECF subfamily id=2862880 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 178.0
  • Bit_score: 164
  • Evalue 1.10e-37
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 161
  • Evalue 2.60e-37

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCGACATCGGCAGACCGCCGCGCCCCTCGCCGCCCGGCCGGCGCCGCCCCTGCTATCCTCGGCGTCGCGCGTCGTCGACCCTTCCCGAATGAACGCACCCGAACAGCCCCCGATCACGAAGCTGCTGGGCGAGTGGCGCAGCGGCGACCCGCGCGCGCTGGACCGGCTGGCCCCTCTCGTCTATGGCGACCTGCGCCTGCTGGCCGAGCGGCATCTGCGCCGCGAAGGCCCGATCACGCTCGACGCGACGGAGCTGGTCCATGAAGCCTGCCTGCGCCTGATCGGTCCTGCCGTCGAGTGGCAGGATCGCGCGCACTTCTTTGCGATCGCCGCCCGCCAGATGCGCCACGTACTCGTCGATCACGCCCGCCGCAAACAGCGCGACAAGCGCGGCGGCGGCGAGGCCGCGGTCACGCTCCAGGCCGACGACGTCCACGACGGCCAGTCGCCGCCGGACATCCTCGCCTTCGATCAGCTGCTGACCCAGCTCTCCGCCGTCGATCCGCGCAAGCGCGACGTGCTGGAGCTGCACTATTTCGGGGGACTGTCCTATCTGGAAATGTCCCATGTGCTGGCAGTGTCGGAGGCGACCATTGATCGCGACCTGCGTTTCGCCAAGGCCTGGCTGCGCCAGGCGCTGCTGGCGTGA
PROTEIN sequence
Length: 217
MRHRQTAAPLAARPAPPLLSSASRVVDPSRMNAPEQPPITKLLGEWRSGDPRALDRLAPLVYGDLRLLAERHLRREGPITLDATELVHEACLRLIGPAVEWQDRAHFFAIAARQMRHVLVDHARRKQRDKRGGGEAAVTLQADDVHDGQSPPDILAFDQLLTQLSAVDPRKRDVLELHYFGGLSYLEMSHVLAVSEATIDRDLRFAKAWLRQALLA*