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scnpilot_p_inoc_scaffold_48_16

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 17599..18360

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 254.0
  • Bit_score: 377
  • Evalue 9.70e-102
  • rbh
DNA-binding response regulator Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 253.0
  • Bit_score: 377
  • Evalue 1.40e-101
LytTr DNA-binding region similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 254.0
  • Bit_score: 242
  • Evalue 1.80e-61

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGACCCTCCGCGTACTGATCGTTGACGATGAACCGATCGCCCGCCGCGGGATAGCGCGGCTGCTGCGGCCGGAGGCGGACATCGACGTCGTCGGAGAGTGCGGTGACGGTGGCGCGGCGATCTCGGCGATCAGCGCGCTTTCGCCGGACCTCGTCTTCCTCGATGTGCAGATGCCCGAACTCGATGGGTTTGCCGTCATCCAAGCCATCGGCGGAAACCGCATGCCCGCGGTCGTGTTCGTGACCGCATTCGACCAACACGCCGTGCGCGCGTTCGATGCGCAGGCGCTCGACTATGTGCTGAAGCCGATCGACCCGGAACGCTTGCGCCGCGCACTGCAGCGCGCTCGCTCCCACCTGGCCCATCCCGATGACGGCTTCGTCCATCGCGTTGCCGAGGCGTTGAAGTCGATGGATCGGGGAGAACTGCAGCGTTACCCCGCGCGACTCGCCATCCGTTCCGAGAGTCGCATTCGATTGATCGACATCGACGAAGTCGATCGCATCGTCGCCGCGGGAAATTACGCCCAGATCCACACAGGGGCGAAACAGCACCGGCTGCGCGAGACGATGGCCAGCCTCGAGTCCCGCCTGGACCCGCAACGCTTCATCCGGGTATCGCGGGCGGCCATCGTCAGCATCGCCCAGATTCGCGAAGTGCAGCCGCTGTTCAATGGCGACTTCGTCGTTCTCCTCAAGAATGGCGCGCAGGTGAACGGCAGCCGCCGCTATCGGGCGGCGCTCGACGTATTGCTTGGCTGA
PROTEIN sequence
Length: 254
MTLRVLIVDDEPIARRGIARLLRPEADIDVVGECGDGGAAISAISALSPDLVFLDVQMPELDGFAVIQAIGGNRMPAVVFVTAFDQHAVRAFDAQALDYVLKPIDPERLRRALQRARSHLAHPDDGFVHRVAEALKSMDRGELQRYPARLAIRSESRIRLIDIDEVDRIVAAGNYAQIHTGAKQHRLRETMASLESRLDPQRFIRVSRAAIVSIAQIREVQPLFNGDFVVLLKNGAQVNGSRRYRAALDVLLG*