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DolJOral78_scaffold_998_17

Organism: DOLJORAL78_Bacteroidia_37_36

partial RP 34 / 55 BSCG 34 / 51 ASCG 5 / 38
Location: 19932..20390

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Bacteroidetes_42_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 152.0
  • Bit_score: 181
  • Evalue 1.10e-42
RNA polymerase, sigma-24 subunit, ECF subfamily id=2059024 bin=GWD2_Bacteroidetes_33_33 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 152.0
  • Bit_score: 180
  • Evalue 1.00e-42
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 148.0
  • Bit_score: 161
  • Evalue 1.90e-37

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Taxonomy

RBG_13_Bacteroidetes_42_15_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 459
ATGTATAACACAAGTTTGCGTATTGTAAACAATTCGGACGAAGCGGAAGACGTGATGCAGGAGTCGTTTTTAACGGCATTTGACAGGCTTGATACTTTTCGCGAGGAAGTGAGTTTTGGAGCATGGCTTAAAAAAATTGTGGTAAATAAATCTTTAGATGCGATCAAAAAACGAAAGCTAAGTTTTGAACTGATAGAAGATGTTGAGCAGCATTTGTCGTCGGACAAAGAAAGCGAGGACCTAACGGGCGATGAAAAAAAACAAGCGGAATGTGTGAAAAACGCAATTTTTAAACTGAAAGACGGTTATCGGATTGTGCTATCGCTCTATCTTCTTGAGGGATACGACCACGACGAAATAGCCGAAATATTAAACATTACAGCCTCAACGTCAAGATCGCAACTTGCAAGAGCAAAAGTTCGTTTGATAAAATTATTAAAAGAACAAAAACAACATTAG
PROTEIN sequence
Length: 153
MYNTSLRIVNNSDEAEDVMQESFLTAFDRLDTFREEVSFGAWLKKIVVNKSLDAIKKRKLSFELIEDVEQHLSSDKESEDLTGDEKKQAECVKNAIFKLKDGYRIVLSLYLLEGYDHDEIAEILNITASTSRSQLARAKVRLIKLLKEQKQH*