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DolZOral124_scaffold_2244

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2244_1
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1510
-----------------
DNA (1509bp)
protein (503aa)
hap; Adhesion and penetration protein autotransporter precursor (EC:3.4.21.-)
Adhesion and penetration protein Hap n=1 Tax=Haemophilus influenzae PittHH RepID=A4NLS9_HAEIF
Haemophilus influenzae strain RMHi93 ctg7180000001674, whole genome shotgun sequence {ECO:0000313|EMBL:KIP48835.1}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pa
DolZOral124_scaffold_2244_2
Hyphomonas sp. L-53-1-40, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1734..2396)
-----------------
DNA (663bp)
protein (221aa)
Glutathione S-transferase family protein n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PQS0_PSEUV
Glutathione S-transferase {ECO:0000313|EMBL:KCZ65950.1}; TaxID=1207058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. L-
glutathione S-transferase family protein
DolZOral124_scaffold_2244_3
Actinobacillus suis, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2453..6004)
-----------------
DNA (3552bp)
protein (1184aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=696748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurel
DNA polymerase III subunit alpha n=1 Tax=Actinobacillus suis H91-0380 RepID=K0FXX0_ACTSU rbh
DolZOral124_scaffold_2244_4
Chelonobacter oris, Chelonobacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6139..6408
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S15 n=19 Tax=Pasteurella multocida RepID=RS15_PASMU
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=505317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Chelon
rpsO; 30S ribosomal protein S15
DolZOral124_scaffold_2244_5
unknown

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6465..6923
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

DolZOral124_scaffold_2244_6
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6926..8332
-----------------
DNA (1407bp)
protein (469aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
Asparagine--tRNA ligase n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R5P7_PASTR
Asparaginyl-tRNA synthetase
DolZOral124_scaffold_2244_7
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8473..9471
-----------------
DNA (999bp)
protein (333aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Semialdehyde dehydrogenase, dimerization domain protein n=2 Tax=Haemophilus parasuis RepID=U4S5V2_HAEPR
Semialdehyde dehydrogenase, dimerization domain protein {ECO:0000313|EMBL:EQA05253.1}; TaxID=1275968 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilu
DolZOral124_scaffold_2244_8
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9503..10597)
-----------------
DNA (1095bp)
protein (365aa)
Competence protein E n=12 Tax=Pasteurella haemolytica RepID=M4XHP7_PASHA
secretin
Secretin {ECO:0000313|EMBL:AKA10833.1}; TaxID=75985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolytica (Pasteurella h
DolZOral124_scaffold_2244_9
unknown

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comp(10612..11124)
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

DolZOral124_scaffold_2244_10
unknown

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comp(11124..11648)
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

DolZOral124_scaffold_2244_11
unknown

Not on your lists

comp(11624..12370)
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

DolZOral124_scaffold_2244_12
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..15027
-----------------
DNA (2628bp)
protein (876aa)
Penicillin-binding protein 1A n=1 Tax=Haemophilus parasuis gx033 RepID=N1V9T5_HAEPR
Membrane penicillin-binding protein 1A {ECO:0000313|EMBL:AHF50007.1}; TaxID=738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophi
penicillin-binding protein 1A
DolZOral124_scaffold_2244_13
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15027..15776
-----------------
DNA (750bp)
protein (250aa)
Putative ribosomal RNA large subunit methyltransferase J n=1 Tax=Haemophilus parainfluenzae HK262 RepID=I2J2U3_HAEPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW15111.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfl
DolZOral124_scaffold_2244_14
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15784..16554)
-----------------
DNA (771bp)
protein (257aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=637911 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Actinobacillus minor NM305 RepID=C5S1Z9_9PAST
UPF0135 protein
DolZOral124_scaffold_2244_15
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17026)
-----------------
DNA (483bp)
protein (161aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W433_HAEP3
(3R)-hydroxymyristoyl-ACP dehydratase
DolZOral124_scaffold_2244_16
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17094..17750)
-----------------
DNA (657bp)
protein (219aa)
Outer membrane protein n=14 Tax=Pasteurella haemolytica RepID=M4XL90_PASHA
membrane protein
OmpH-like outer membrane protein 26 {ECO:0000313|EMBL:AGK02058.1}; TaxID=1316932 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheim
DolZOral124_scaffold_2244_17
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17776..20187)
-----------------
DNA (2412bp)
protein (804aa)
Outer membrane protein assembly factor BamA n=1 Tax=Mannheimia haemolytica PHL213 RepID=A7JRG6_PASHA
outer membrane protein assembly protein YaeT
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=75985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pas
DolZOral124_scaffold_2244_18
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20230..21540)
-----------------
DNA (1311bp)
protein (437aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1434215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellacea
Putative zinc metalloprotease n=1 Tax=Actinobacillus minor NM305 RepID=C5S2Z3_9PAST
Protease EcfE
DolZOral124_scaffold_2244_19
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21542..22402)
-----------------
DNA (861bp)
protein (287aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1275967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
Phosphatidate cytidylyltransferase n=3 Tax=Haemophilus parasuis RepID=U4RM06_HAEPR
phosphatidate cytidylyltransferase
DolZOral124_scaffold_2244_20
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22414..23124)
-----------------
DNA (711bp)
protein (237aa)
UDP pyrophosphate synthase (EC:2.5.1.31)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=4 Tax=Pasteurella haemolytica RepID=S5FII6_PASHA
DolZOral124_scaffold_2244_21
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23125..24321)
-----------------
DNA (1197bp)
protein (399aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Haemophilus parasuis MN-H RepID=U4RYU1_HAEPR rbh
DolZOral124_scaffold_2244_22
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24326..24883)
-----------------
DNA (558bp)
protein (186aa)
ribosome recycling factor n=1 Tax=Actinobacillus capsulatus RepID=UPI0003818BC3
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1095743 species="Bacteria;
DolZOral124_scaffold_2244_23
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24962..26146)
-----------------
DNA (1185bp)
protein (395aa)
FAD-dependent monooxygenase n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R515_PASTR
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:EXI63076.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Man
FAD-dependent monooxygenase
DolZOral124_scaffold_2244_24
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26296..27645
-----------------
DNA (1350bp)
protein (450aa)
TldD/PmbA family protein n=1 Tax=Actinobacillus ureae ATCC 25976 RepID=E8KHG9_9PAST
Protein pmbA
Peptidase PmbA {ECO:0000313|EMBL:EXI61987.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolytica seroty
DolZOral124_scaffold_2244_25
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27647..29017
-----------------
DNA (1371bp)
protein (457aa)
Aldehyde dehydrogenase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IWR4_CYCMS
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (st
DolZOral124_scaffold_2244_26
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29296..29463
-----------------
DNA (168bp)
protein (56aa)
Cold shock-like protein CspC n=20 Tax=Pasteurella multocida RepID=G7SUR8_PASMD
cspC; cold shock-like protein CspC
Protein MsmB {ECO:0000313|EMBL:AKD37544.1}; TaxID=1304873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella.;" source="Pasteurella multocida subsp. m
DolZOral124_scaffold_2244_27
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29726..31546
-----------------
DNA (1821bp)
protein (607aa)
Hemolysin-type calcium-binding repeat family protein n=2 Tax=Haemophilus parasuis RepID=U4SLJ5_HAEPR rbh
Hemolysin-type calcium-binding repeat family protein {ECO:0000313|EMBL:EQA10735.1}; TaxID=1275971 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;
triacylglycerol lipase
DolZOral124_scaffold_2244_28
Actinobacillus equuli, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31632..33023)
-----------------
DNA (1392bp)
protein (464aa)
cysS; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase n=1 Tax=Actinobacillus capsulatus RepID=UPI00035D74AA
DolZOral124_scaffold_2244_29
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33032..34867)
-----------------
DNA (1836bp)
protein (612aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1432056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurella
Peptidylprolyl isomerase n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=E2P8K4_PASHA
Peptidyl-prolyl cis-trans isomerase D
DolZOral124_scaffold_2244_30
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

35003..35566
-----------------
DNA (564bp)
protein (188aa)
N-6 DNA Methylase n=1 Tax=Streptococcus sp. M334 RepID=E9FL58_9STRE
N-6 DNA Methylase {ECO:0000313|EMBL:CEM61493.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
N-6 DNA methylase
Displaying 30 items

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