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DolZOral124_scaffold_2432

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2432_1
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..299
-----------------
DNA (297bp)
protein (99aa)
TPR repeat-containing protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S9R1_PROA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJD37158.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
DolZOral124_scaffold_2432_2
unknown

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574..780
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

DolZOral124_scaffold_2432_3
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1541
-----------------
DNA (549bp)
protein (183aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NZL2_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ58584.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
DolZOral124_scaffold_2432_4
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1698..1838
-----------------
DNA (141bp)
protein (47aa)
50S ribosomal protein L34 n=1 Tax=Ruthia magnifica subsp. Calyptogena magnifica RepID=A1AXT4_RUTMC
50S ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozo
DolZOral124_scaffold_2432_5
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1862..2272
-----------------
DNA (411bp)
protein (137aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CN01_9ALTE
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
DolZOral124_scaffold_2432_6
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2236..2517
-----------------
DNA (282bp)
protein (94aa)
Putative membrane protein insertion efficiency factor n=17 Tax=Pasteurella multocida RepID=YIDD_PASMU
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1032868 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurell
DolZOral124_scaffold_2432_7
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2729..4420
-----------------
DNA (1692bp)
protein (564aa)
Membrane protein insertase YidC n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZI11_9GAMM
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
preprotein translocase subunit YidC
DolZOral124_scaffold_2432_8
Vibrio fortis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4674..5990
-----------------
DNA (1317bp)
protein (439aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=212667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrio
tRNA modification GTPase MnmE n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RAF7_KANKD
tRNA modification GTPase TrmE
DolZOral124_scaffold_2432_9
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5991..6512
-----------------
DNA (522bp)
protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZHA1_9GAMM
DolZOral124_scaffold_2432_10
Acinetobacter ursingii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6577..7230
-----------------
DNA (654bp)
protein (218aa)
nfnB; dihydropteridine reductase (EC:1.5.1.34)
Uncharacterized protein n=1 Tax=Acinetobacter ursingii ANC 3649 RepID=N9BZK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV79012.1}; TaxID=1257043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter ursi
DolZOral124_scaffold_2432_11
unknown

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comp(7523..7939)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

DolZOral124_scaffold_2432_12
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7946..9604)
-----------------
DNA (1659bp)
protein (553aa)
Electron-transferring-flavoproteindehydrogenase {ECO:0000313|EMBL:ACV26926.1}; EC=1.5.5.1 {ECO:0000313|EMBL:ACV26926.1};; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospi
electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Kangiella aquimarina RepID=UPI000367C425 rbh
electron-transferring-flavoprotein dehydrogenase
DolZOral124_scaffold_2432_13
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9993..10703)
-----------------
DNA (711bp)
protein (237aa)
Pseudouridine synthase n=1 Tax=Sulfurovum sp. AR RepID=I2K4Z7_9PROT
tRNA pseudouridine synthase C {ECO:0000313|EMBL:EIF50299.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
pseudouridine synthase
DolZOral124_scaffold_2432_14
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11059..12426
-----------------
DNA (1368bp)
protein (456aa)
PurB protein (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JBW9_9PSED
DolZOral124_scaffold_2432_15
Neisseria macacae, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12700..13311
-----------------
DNA (612bp)
protein (204aa)
Membrane protein n=1 Tax=Neisseria macacae ATCC 33926 RepID=F9EUQ4_9NEIS
Membrane protein {ECO:0000313|EMBL:EGQ77596.1}; TaxID=997348 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria macacae ATCC 33926.;"
membrane protein
DolZOral124_scaffold_2432_16
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13553..14779)
-----------------
DNA (1227bp)
protein (409aa)
Major facilitator superfamily MFS_1 n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VS53_MARMS rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABR69282.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strai
DolZOral124_scaffold_2432_17
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14911..17154)
-----------------
DNA (2244bp)
protein (748aa)
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI000363AB86
Outer membrane receptor protein, mostly Fe transport {ECO:0000313|EMBL:KES18907.1}; TaxID=1445513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gill
TonB-dependent receptor
DolZOral124_scaffold_2432_18
Acinetobacter sp. ANC 3789, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17771..18745)
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3789 RepID=N8V8T6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU79069.1}; TaxID=1217714 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
AraC family transcriptional regulator
DolZOral124_scaffold_2432_19
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18782..19897)
-----------------
DNA (1116bp)
protein (372aa)
Uncharacterized protein n=1 Tax=Vibrio sp. MED222 RepID=A3XRZ5_9VIBR rbh
Siderophore-interacting protein
Siderophore-interacting protein {ECO:0000313|EMBL:AEF53275.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (st
DolZOral124_scaffold_2432_20
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20189..23539
-----------------
DNA (3351bp)
protein (1117aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=572477 species="Bacteria; Pr
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000370D935
transcription-repair coupling factor
DolZOral124_scaffold_2432_21
unknown

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comp(23595..23828)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

DolZOral124_scaffold_2432_22
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23936..24199
-----------------
DNA (264bp)
protein (88aa)
DNA-binding helix-turn-helix protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV58_9GAMM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEV23862.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydr
XRE family transcripitonal regulator
DolZOral124_scaffold_2432_23
unknown

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comp(24196..24384)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

DolZOral124_scaffold_2432_24
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24837..26327
-----------------
DNA (1491bp)
protein (497aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9N2_9GAMM
tRNA-i(6)A37 thiotransferase enzyme MiaB
DolZOral124_scaffold_2432_25
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26354..27313
-----------------
DNA (960bp)
protein (320aa)
PhoH family protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9N1_9GAMM
PhoH family protein {ECO:0000313|EMBL:EEV88719.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacteriu
phoH; phospahte starvation induced protein PhoH
DolZOral124_scaffold_2432_26
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27320..27817
-----------------
DNA (498bp)
protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=728 species="Bacteria; Prote
Endoribonuclease YbeY n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6ES76_AVIPA
putative metalloprotease
DolZOral124_scaffold_2432_27
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27880..28215)
-----------------
DNA (336bp)
protein (112aa)
XRE family transcriptional regulator {ECO:0000313|EMBL:EHJ05162.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Mar
DolZOral124_scaffold_2432_28
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28225..28485)
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JVZ6_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM36426.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
DolZOral124_scaffold_2432_29
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28906..30726)
-----------------
DNA (1821bp)
protein (607aa)
GTP-binding protein TypA {ECO:0000313|EMBL:EEV88313.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EEV88313.1};; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteri
GTP-binding protein TypA n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NAU2_9GAMM
typA; GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
DolZOral124_scaffold_2432_30
unknown

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comp(30924..31226)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

View Taxonomy