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DolZOral124_scaffold_2617

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2617_1
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

133..357
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00036DCDFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEN51075.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canim
DolZOral124_scaffold_2617_2
Neisseria weaveri, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

699..2975
-----------------
DNA (2277bp)
protein (759aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1051985 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; N
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Neisseria weaveri LMG 5135 RepID=G2DK92_9NEIS rbh
DolZOral124_scaffold_2617_3
Neisseria weaveri, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3120..4310
-----------------
DNA (1191bp)
protein (397aa)
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, beta subunit n=1 Tax=Neisseria weaveri ATCC 51223 RepID=G2DV80_9NEIS
Ribonucleoside-diphosphate reductase, beta subunit {ECO:0000313|EMBL:EGV38048.1}; TaxID=1051985 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source=
DolZOral124_scaffold_2617_4
Neisseria elongata, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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4325..4714
-----------------
DNA (390bp)
protein (130aa)
2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=Neisseria elongata subsp. glycolytica ATCC 29315 RepID=D4DR25_NEIEG
[Fe-S]-binding protein
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EFE49773.1}; [Fe-S]-binding protein {ECO:0000313|EMBL:AJE18123.1}; TaxID=546263 species="Bacteria; Proteobacteria; Betaproteobacteri
DolZOral124_scaffold_2617_5
unknown

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4942..5499
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

DolZOral124_scaffold_2617_6
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5521..7668
-----------------
DNA (2148bp)
protein (716aa)
ATP-dependent DNA helicase recQ n=1 Tax=Kordia algicida OT-1 RepID=A9DV02_9FLAO rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EZH75359.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atl
ATP-dependent DNA helicase RecQ
DolZOral124_scaffold_2617_7
unknown

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7696..7980
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

DolZOral124_scaffold_2617_8
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8449..9870)
-----------------
DNA (1422bp)
protein (474aa)
Uncharacterized protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZHV6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHM52366.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobact
lipoprotein
DolZOral124_scaffold_2617_9
unknown

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comp(10050..10595)
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

DolZOral124_scaffold_2617_10
Cryptococcus gattii, Filobasidiella, Tremellales, Tremellomycetes, Basidiomycota, Fungi

Not on your lists

comp(10754..11044)
-----------------
DNA (291bp)
protein (97aa)
Cleavage stimulation factor, 77kDa subunit, putative n=1 Tax=Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) RepID=E6R0T7_CRYGW
Cleavage stimulation factor, 77kDa subunit, putative {ECO:0000313|EMBL:ADV20410.1}; TaxID=367775 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Treme
hypothetical protein
DolZOral124_scaffold_2617_11
unknown

Not on your lists

comp(11110..11820)
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

DolZOral124_scaffold_2617_12
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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11920..12174
-----------------
DNA (255bp)
protein (85aa)
Transcriptional regulator n=3 Tax=Haemophilus parasuis RepID=N1VBW1_HAEPR
XRE family transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:EQA12404.1}; TaxID=1275970 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus
DolZOral124_scaffold_2617_13
unknown

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12550..12792
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

DolZOral124_scaffold_2617_14
unknown

Not on your lists

12792..13085
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

DolZOral124_scaffold_2617_15
unknown

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comp(13273..13743)
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

DolZOral124_scaffold_2617_16
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14154..15185
-----------------
DNA (1032bp)
protein (344aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein {ECO:0000313|EMBL:EDY86106.1}; EC=3.6.3.27 {ECO:0000313|EMBL:EDY86106.1};; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteob
Phosphate ABC transporter, periplasmic phosphate-binding protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWC9_9GAMM
ABC phosphate transporter eriplasmic phosphate-binding protein
DolZOral124_scaffold_2617_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15334..16677
-----------------
DNA (1344bp)
protein (448aa)
phosphate ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B423BF
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:EIJ33770.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotric
pstC; phosphate ABC transporter permease PstC
DolZOral124_scaffold_2617_18
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16707..17987
-----------------
DNA (1281bp)
protein (427aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Beggiatoa sp. PS RepID=A7BSN6_9GAMM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EDN70445.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source=
ABC phosphate transporter inner membrane protein, PstA-like protein
DolZOral124_scaffold_2617_19
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18000..18824
-----------------
DNA (825bp)
protein (275aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate transporter ATP-binding protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KKM5_SIMAS
phosphate transporter ATP-binding protein
DolZOral124_scaffold_2617_20
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18842..19567
-----------------
DNA (726bp)
protein (242aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Photobacterium profundum RepID=Q6LU81_PHOPR
Transcriptional regulator PhoU {ECO:0000313|EMBL:AKE51459.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella g
transcriptional regulator PhoU
DolZOral124_scaffold_2617_21
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19632..20345
-----------------
DNA (714bp)
protein (238aa)
chemotaxis protein CheY n=1 Tax=Catenovulum agarivorans RepID=UPI00035F8C22
Winged helix family two component transcriptional regulator PhoB {ECO:0000313|EMBL:EWH09550.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
two component transcriptional regulator
DolZOral124_scaffold_2617_22
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20362..21690
-----------------
DNA (1329bp)
protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Begg
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00036CEC63
DolZOral124_scaffold_2617_23
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21776..22864)
-----------------
DNA (1089bp)
protein (363aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LG84_BURGS
Cobyrinic acid a,c-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:AEA61735.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
DolZOral124_scaffold_2617_24
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23142..24431)
-----------------
DNA (1290bp)
protein (430aa)
Uracil-xanthine permease n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V0W7_ARCNC
uracil-xanthine permease
Uracil-xanthine permease {ECO:0000313|EMBL:ADG93929.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter n
DolZOral124_scaffold_2617_25
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24603..25112)
-----------------
DNA (510bp)
protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicom
Probable ferritin-1 n=16 Tax=Haemophilus influenzae RepID=FTN1_HAEIN
ferritin like protein 1
DolZOral124_scaffold_2617_26
unknown

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25673..25843
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

DolZOral124_scaffold_2617_27
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25973..29521
-----------------
DNA (3549bp)
protein (1183aa)
rne; ribonuclease E (EC:3.1.4.-)
Transaldolase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZFU9_9GAMM rbh
Transaldolase {ECO:0000313|EMBL:EHM53692.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium valv
DolZOral124_scaffold_2617_trna_1
unknown

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29600..29673
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_2617_28
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30012..35510
-----------------
DNA (5499bp)
protein (1833aa)
glutamate synthase (NADPH) large subunit (EC:1.4.1.13)
Glutamate synthase (NADPH) large chain {ECO:0000313|EMBL:AFJ01753.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AFJ01753.1};; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pi
Glutamate synthase (NADPH) large chain n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YFR0_METFJ
DolZOral124_scaffold_2617_29
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35531..37300
-----------------
DNA (1770bp)
protein (590aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207};; TaxID=1238441 specie
Putative Sulfite reductase, alpha subunit (Flavoprotein) n=8 Tax=Vibrio nigripulchritudo RepID=U4DUX2_9VIBR
putative Sulfite reductase, alpha subunit (flavoprotein)
Displaying 30 items

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