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DolZOral124_scaffold_2920

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2920_1
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..657)
-----------------
DNA (657bp)
protein (219aa)
ABC transporter, solute-binding protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X5Z6_PROPF
ABC transporter substrate-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AFN47064.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionib
DolZOral124_scaffold_2920_2
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

862..1962
-----------------
DNA (1101bp)
protein (367aa)
ROK family protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y011_PROPF rbh
ROK family protein rbh
ROK family protein {ECO:0000313|EMBL:AFN45385.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum
DolZOral124_scaffold_2920_3
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1959..4178)
-----------------
DNA (2220bp)
protein (740aa)
Isocitrate dehydrogenase (NADP) {ECO:0000313|EMBL:CCH77931.1}; EC=1.1.1.42 {ECO:0000313|EMBL:CCH77931.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetraspha
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Sporichthya polymorpha RepID=UPI0003662E80 rbh
DolZOral124_scaffold_2920_4
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4416..4646
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GIU2_PROFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL56014.1}; TaxID=754252 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freuden
DolZOral124_scaffold_2920_5
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4618..5607
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X0U2_PROPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN45219.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propion
DolZOral124_scaffold_2920_trna_6
unknown

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comp(5649..5729)
-----------------
DNA (81bp)
transferRNA
DolZOral124_scaffold_2920_trna_5
unknown

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comp(5755..5828)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_2920_trna_4
unknown

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comp(5975..6047)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_2920_6
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6107..7696)
-----------------
DNA (1590bp)
protein (530aa)
SH3 domain protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y0V0_PROPF
SH3 domain-containing protein
SH3 domain protein {ECO:0000313|EMBL:AFN45635.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum
DolZOral124_scaffold_2920_7
unknown

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comp(8006..8647)
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

DolZOral124_scaffold_2920_trna_1
unknown

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8714..8792
-----------------
DNA (79bp)
transferRNA
DolZOral124_scaffold_2920_8
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8966..9535
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A2DD
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:EYT52726.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
putative thioesterase
DolZOral124_scaffold_2920_9

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comp(9747..10166)
-----------------
DNA (420bp)
protein (140aa)
Transcriptional regulator with HTH domain protein n=1 Tax=mine drainage metagenome RepID=T1AY58_9ZZZZ
Transcriptional regulator with HTH domain protein {ECO:0000313|EMBL:EQD62477.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
transcriptional regulator
DolZOral124_scaffold_2920_10
Planococcus donghaensis, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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10374..11018
-----------------
DNA (645bp)
protein (215aa)
TetR family transcriptional regulator n=1 Tax=Planococcus donghaensis MPA1U2 RepID=E7RD95_9BACL
TetR family transcriptional regulator {ECO:0000313|EMBL:EGA91045.1}; TaxID=933115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus donghaensis MPA
TetR family transcriptional regulator
DolZOral124_scaffold_2920_11
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11163..11666)
-----------------
DNA (504bp)
protein (168aa)
Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BRD1_TERTT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACR11982.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" so
DolZOral124_scaffold_2920_12
Corynebacterium genitalium, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11828..12355)
-----------------
DNA (528bp)
protein (176aa)
Macro domain protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=D7WD40_9CORY
Macro domain protein {ECO:0000313|EMBL:EFK54071.1}; TaxID=585529 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium genitalium ATCC 33
hypothetical protein
DolZOral124_scaffold_2920_13
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12470..14224)
-----------------
DNA (1755bp)
protein (585aa)
succinate dehydrogenase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037A1081 rbh
Succinate dehydrogenase {ECO:0000313|EMBL:EYT56628.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
succinate dehydrogenase
DolZOral124_scaffold_2920_14
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14301..15245
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036256C2 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EYT56629.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;
putative transcriptional regulator, LysR family
DolZOral124_scaffold_2920_15
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15370..16059
-----------------
DNA (690bp)
protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDY5_INTC7
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU47598.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intras
DolZOral124_scaffold_2920_16
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16059..17153
-----------------
DNA (1095bp)
protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; In
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SDY6_INTC7 rbh
integral membrane sensor signal transduction histidine kinase
DolZOral124_scaffold_2920_17
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17202..18071)
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037E2F26
Uncharacterized protein {ECO:0000313|EMBL:EWT07007.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
hypothetical protein
DolZOral124_scaffold_2920_18
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18199..19548
-----------------
DNA (1350bp)
protein (450aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6P6_INTC7 rbh
Serine ammonia-lyase {ECO:0000313|EMBL:EWS99773.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;
DolZOral124_scaffold_2920_19
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20157..20729)
-----------------
DNA (573bp)
protein (191aa)
tag; DNA-3-methyladenine glycosylase 1 (EC:3.2.2.20)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:AFN45624.1}; EC=3.2.2.20 {ECO:0000313|EMBL:AFN45624.1};; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae;
DNA-3-methyladenine glycosylase 1 n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X211_PROPF
DolZOral124_scaffold_2920_trna_2
unknown

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20850..20928
-----------------
DNA (79bp)
transferRNA
DolZOral124_scaffold_2920_20
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20999..21496
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000362A6BE
Uncharacterized protein {ECO:0000313|EMBL:EZP27440.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
DolZOral124_scaffold_2920_21
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21571..23520
-----------------
DNA (1950bp)
protein (650aa)
Conserved membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BCX2_9MICO rbh
hypothetical protein
Conserved membrane protein {ECO:0000313|EMBL:CCE74768.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. neb
DolZOral124_scaffold_2920_22
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23634..25073
-----------------
DNA (1440bp)
protein (480aa)
glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y5C0_PROPF rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium
DolZOral124_scaffold_2920_23
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25091..26068
-----------------
DNA (978bp)
protein (326aa)
prs_1; ribose-phosphate diphosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6WU29_PROPF rbh
DolZOral124_scaffold_2920_24
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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26211..26843
-----------------
DNA (633bp)
protein (211aa)
50S ribosomal protein L25 n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B392F5
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=408672 sp
rplY; 50S ribosomal protein L25
DolZOral124_scaffold_2920_25
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26843..27430
-----------------
DNA (588bp)
protein (196aa)
pth; aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XMX1_PROPF
Displaying items 1-30 of 45 in total

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