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DolZOral124_scaffold_1085

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1085_trna_1
unknown

Not on your lists

comp(7..80)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1085_1
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(99..728)
-----------------
DNA (630bp)
protein (210aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZX83_THEET
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGD51259.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobact
RNA polymerase factor sigma-70
DolZOral124_scaffold_1085_2
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(828..1640)
-----------------
DNA (813bp)
protein (271aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036EE67E
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEX68424.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokel
RNA methyltransferase
DolZOral124_scaffold_1085_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1653..2078)
-----------------
DNA (426bp)
protein (142aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
Mini-ribonuclease 3 n=1 Tax=Thermincola potens (strain JR) RepID=D5X9T7_THEPJ
ribonuclease III
DolZOral124_scaffold_1085_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2081..3490)
-----------------
DNA (1410bp)
protein (470aa)
Cysteine--tRNA ligase n=1 Tax=Clostridium sp. CAG:253 RepID=R6M3V0_9CLOT
cysteinyl-tRNA synthetase
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1085_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3711..5192)
-----------------
DNA (1482bp)
protein (494aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1156417 species="Bacteria; F
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4L0V8_9FIRM
DolZOral124_scaffold_1085_6
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(5415..8339)
-----------------
DNA (2925bp)
protein (975aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q2Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30025.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
exported protein of unknown function
DolZOral124_scaffold_1085_7
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8367..10244)
-----------------
DNA (1878bp)
protein (626aa)
O-antigen polymerase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKE0_9FIRM
polymerase
Polymerase {ECO:0000313|EMBL:AHF08085.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15
DolZOral124_scaffold_1085_8
Fervidobacterium nodosum, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(10514..10783)
-----------------
DNA (270bp)
protein (90aa)
Acylphosphatase; EC=3.6.1.7;; Acylphosphate phosphohydrolase; TaxID=381764 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium nodosum (str
Acylphosphatase n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=ACYP_FERNB
acylphosphatase
DolZOral124_scaffold_1085_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10867..11133)
-----------------
DNA (267bp)
protein (89aa)
Cysteine-rich small domain protein n=2 Tax=Clostridium bifermentans RepID=T4VUK1_CLOBI
Cysteine-rich small domain protein {ECO:0000313|EMBL:EQK48178.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridiu
metal-binding protein
DolZOral124_scaffold_1085_10
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11181..12704)
-----------------
DNA (1524bp)
protein (508aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Clostridium ultunense Esp RepID=M1ZFI3_9CLOT
DolZOral124_scaffold_1085_11
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12720..13820)
-----------------
DNA (1101bp)
protein (367aa)
30S ribosomal protein S1 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT
RNA binding S1 domain protein {ECO:0000313|EMBL:EET86159.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P
rspA; 30S ribosomal protein S1
DolZOral124_scaffold_1085_12
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13834..15216)
-----------------
DNA (1383bp)
protein (461aa)
Putative Thymidylate synthase (FAD) (ThyX) n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VIB6_CLOAI
Strain NCTC 7096 contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIV57485.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
DolZOral124_scaffold_1085_13
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15279..16562)
-----------------
DNA (1284bp)
protein (428aa)
serS2; seryl-tRNA synthetase SerS (EC:6.1.1.11)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KQG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE77978.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococ
DolZOral124_scaffold_1085_14
unknown

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comp(16730..16843)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

DolZOral124_scaffold_1085_15
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16843..18222)
-----------------
DNA (1380bp)
protein (460aa)
ald; Ald (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQS2_CLOSH
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium s
DolZOral124_scaffold_1085_16
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(18222..18866)
-----------------
DNA (645bp)
protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HCS9_9LEPT
TetR family transcriptional regulator Tax=GWC1_Treponema_61_84_curated
putative transcriptional regulator
DolZOral124_scaffold_1085_17
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18873..19658)
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6W5S6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB77177.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
hypothetical protein
DolZOral124_scaffold_1085_18
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(19658..20659)
-----------------
DNA (1002bp)
protein (334aa)
Transketolase n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6ULE4_9MICO
Transketolase {ECO:0000313|EMBL:GAB77176.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
transketolase central region
DolZOral124_scaffold_1085_19
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20661..21515)
-----------------
DNA (855bp)
protein (285aa)
Transketolase domain protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y388_9FIRM
Transketolase domain protein {ECO:0000313|EMBL:CDA19289.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Rumi
transketolase
DolZOral124_scaffold_1085_20
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(21525..22766)
-----------------
DNA (1242bp)
protein (414aa)
putative glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC1_Treponema_61_84_curated
Putative aminotransferase n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VKC4_9MICO rbh
glutamate-1-semialdehyde 2,1-aminomutase
DolZOral124_scaffold_1085_21
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22776..23531)
-----------------
DNA (756bp)
protein (252aa)
Uncharacterized protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VQ00_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB77450.1}; TaxID=1184607 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Austwickia.;" source="Austwickia chelonae NBRC 105200.;"
hypothetical protein
DolZOral124_scaffold_1085_22
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23670..25058)
-----------------
DNA (1389bp)
protein (463aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {EC
asnS; asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. BL8 RepID=T0MTG4_9CLOT
DolZOral124_scaffold_1085_23
unknown

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comp(25363..26313)
-----------------
DNA (951bp)
protein (317aa)

This feature has no annotations

DolZOral124_scaffold_1085_24
Gossypium raimondii, Gossypium, Malvales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(26324..29761)
-----------------
DNA (3438bp)
protein (1146aa)
Uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WWJ1_ANODA
Uncharacterized protein {ECO:0000313|EMBL:KJB44588.1}; TaxID=29730 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
tenascin-like
DolZOral124_scaffold_1085_25
unknown

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comp(29771..31138)
-----------------
DNA (1368bp)
protein (456aa)

This feature has no annotations

DolZOral124_scaffold_1085_26
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31148..31702)
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JMM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQB25539.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
hypothetical protein
DolZOral124_scaffold_1085_27
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(31775..32965)
-----------------
DNA (1191bp)
protein (397aa)
Protein serine/threonine phosphatase with Cache sensor id=2193871 bin=GWE2_Spirochaete_31_10 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
putative PAS/PAC sensor protein
Tax=BJP_IG2069_Spirochaetales_48_31
DolZOral124_scaffold_1085_28
unknown

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comp(32987..33325)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

DolZOral124_scaffold_1085_29
Staphylococcus agnetis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33476..33973
-----------------
DNA (498bp)
protein (166aa)
thermonuclease n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B3D0E4
thermonuclease
Thermonuclease {ECO:0000313|EMBL:KFE42796.1}; TaxID=985762 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus agnetis.;"
Displaying items 1-30 of 39 in total

View Taxonomy