ggKbase home page

DolZOral124_scaffold_1099

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1099_1
unknown

Not on your lists

comp(2..1003)
-----------------
DNA (1002bp)
protein (334aa)

This feature has no annotations

DolZOral124_scaffold_1099_2
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1119..2021)
-----------------
DNA (903bp)
protein (301aa)
rfaD; ADP-glyceromanno-heptose 6-epimerase (EC:5.1.3.20)
UDP-glucose 4-epimerase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJR5_9BACT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ELR68493.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
DolZOral124_scaffold_1099_3
Sulfurospirillum barnesii, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2033..2638)
-----------------
DNA (606bp)
protein (202aa)
Methyltransferase family protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3XTV3_SULBS
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AFL67377.1}; TaxID=760154 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source
DolZOral124_scaffold_1099_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2719..3372)
-----------------
DNA (654bp)
protein (218aa)
Phosphoadenylyl-sulfate reductase (thioredoxin) {ECO:0000256|SAAS:SAAS00089161}; EC=1.8.4.8 {ECO:0000256|SAAS:SAAS00089161};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales;
cysH; phosphoadenylylsulfate reductase (EC:1.8.4.8)
Phosphoadenylyl-sulfate reductase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JM75_9BACT
DolZOral124_scaffold_1099_5
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(3527..6793)
-----------------
DNA (3267bp)
protein (1089aa)
preprotein translocase subunit SecA id=1834408 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
secA; preprotein translocase subunit SecA
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1099_6
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7146..7823)
-----------------
DNA (678bp)
protein (226aa)
TonB family protein; K03832 periplasmic protein TonB Tax=GWA2_Bacteroidetes_31_9_curated
TonB id=4224461 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
energy transducer TonB
DolZOral124_scaffold_1099_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8147..10708)
-----------------
DNA (2562bp)
protein (854aa)
Peptidoglycan-associated lipoprotein, OmpA family id=4001137 bin=GWF2_Bacteroidetes_38_335 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
ompA; OmpA family peptidoglycan-associated lipoprotein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
DolZOral124_scaffold_1099_8
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11003..13066)
-----------------
DNA (2064bp)
protein (688aa)
Uncharacterized protein id=3893030 bin=GWF2_Bacteroidetes_33_38 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
DolZOral124_scaffold_1099_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13183..14520)
-----------------
DNA (1338bp)
protein (446aa)
glutamate dehydrogenase (NAD) (EC:1.4.1.2 1.4.1.4) Tax=GWE2_Bacteroidetes_40_63_curated
glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4)
Glutamate dehydrogenase id=4424682 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DolZOral124_scaffold_1099_10
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14681..15235)
-----------------
DNA (555bp)
protein (185aa)
Glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentan
glutathione peroxidase-like protein bsaA id=2062811 bin=GWE2_Bacteroidetes_40_63 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
DolZOral124_scaffold_1099_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15384..15935)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI000255A056
hypothetical protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
DolZOral124_scaffold_1099_12
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(16072..17376)
-----------------
DNA (1305bp)
protein (435aa)
MATE efflux family protein n=2 Tax=Bacteroides ovatus RepID=A7LZ29_BACOV
putative efflux protein, MATE family
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1099_13
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17390..18937)
-----------------
DNA (1548bp)
protein (516aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000362C25F
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
DolZOral124_scaffold_1099_14
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18924..19451)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037F0D33
Uncharacterized protein {ECO:0000313|EMBL:KGL60791.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
DolZOral124_scaffold_1099_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19491..22760)
-----------------
DNA (3270bp)
protein (1090aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT3_CHIPD rbh
exodeoxyribonuclease V subunit gamma
DolZOral124_scaffold_1099_16
unknown

Not on your lists

comp(23018..24199)
-----------------
DNA (1182bp)
protein (394aa)

This feature has no annotations

DolZOral124_scaffold_1099_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24590..25057
-----------------
DNA (468bp)
protein (156aa)
Ferritin Dps family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFH6_FLUTR
ferritin
Ferritin Dps family protein {ECO:0000313|EMBL:AEA45690.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (
DolZOral124_scaffold_1099_18
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25506..26204
-----------------
DNA (699bp)
protein (233aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B id=4326555 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tRNA pseudouridine 55 synthase
DolZOral124_scaffold_1099_19
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26220..27272
-----------------
DNA (1053bp)
protein (351aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWB2_Bacteroidetes_41_8_curated
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002F5C92C
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
DolZOral124_scaffold_1099_20
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27508..29139
-----------------
DNA (1632bp)
protein (544aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=GWF2_Bacteroidetes_38_335_curated
1-pyrroline-5-carboxylate dehydrogenase id=4128503 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
delta-1-pyrroline-5-carboxylate dehydrogenase
DolZOral124_scaffold_1099_21
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29815..30042
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein id=4462755 bin=GWF2_Bacteroidetes_38_335 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
ferredoxin, 4Fe-4S
DolZOral124_scaffold_1099_22
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30068..31153
-----------------
DNA (1086bp)
protein (362aa)
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=CG_Maritim_01
2-ketoisovalerate ferredoxin oxidoreductase (EC:1.2.7.7)
2-ketoisovalerate ferredoxin reductase id=4580044 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DolZOral124_scaffold_1099_23
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

31160..31945
-----------------
DNA (786bp)
protein (262aa)
putative 2-oxoglutarate synthase subunit id=2155185 bin=GWE2_Bacteroidetes_42_42 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
2-oxoglutarate oxidoreductase
Tax=BJP_IG2103_Bacteroidetes_37_22
DolZOral124_scaffold_1099_24
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31955..32509
-----------------
DNA (555bp)
protein (185aa)
Pyruvate/ketoisovalerate oxidoreductase; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PG78_9PORP
Pyruvate/ketoisovalerate oxidoreductase
DolZOral124_scaffold_1099_25
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

32731..33237
-----------------
DNA (507bp)
protein (169aa)
Flavodoxin n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCY7_9BACT
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
flavodoxin
DolZOral124_scaffold_1099_26
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33256..33651
-----------------
DNA (396bp)
protein (132aa)
UPI0003D1B849 related cluster n=1 Tax=unknown RepID=UPI0003D1B849
Uncharacterized protein {ECO:0000313|EMBL:GAF01913.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans
hypothetical protein
DolZOral124_scaffold_1099_27
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33766..34176
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036309E6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW58590.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orie
DolZOral124_scaffold_1099_28
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

34286..35341
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein n=1 Tax=Brachyspira hyodysenteriae RepID=UPI0003621D33
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:KIJ85538.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scy
hypothetical protein
DolZOral124_scaffold_1099_29
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists


35894..39334
-----------------
DNA (3441bp)
protein (1147aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9ZCF6_ODOSD
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1099_30
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39378..39749
-----------------
DNA (372bp)
protein (124aa)
molecular chaperone DnaK n=1 Tax=Butyricimonas synergistica RepID=UPI00036FA569
Uncharacterized protein {ECO:0000313|EMBL:CCZ81814.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odo
molecular chaperone DnaK
Displaying items 1-30 of 31 in total

View Taxonomy