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DolZOral124_scaffold_1104

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1104_1
Gracilibacillus boraciitolerans, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..1047)
-----------------
DNA (1047bp)
protein (349aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1298598 species="Bacteri
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI000373CA31
hypothetical protein
DolZOral124_scaffold_1104_2
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1031..1705)
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=2 Tax=Desulfotomaculum RepID=F0DNJ2_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF94695.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carb
DolZOral124_scaffold_1104_3
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1710..2789)
-----------------
DNA (1080bp)
protein (360aa)
RNA polymerase sigma factor SigA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MG96_ALKOO
RpoD family RNA polymerase sigma factor
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremland
DolZOral124_scaffold_1104_4
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2805..4631)
-----------------
DNA (1827bp)
protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1487921 species="Bacteria; Firmicutes;
DNA primase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTX8_9CLOT
DNA primase
DolZOral124_scaffold_1104_5
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4618..5637)
-----------------
DNA (1020bp)
protein (340aa)
deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Bacteroides pectinophilus CAG:437 RepID=R7AZH6_9BACE
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
DolZOral124_scaffold_1104_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5656..6480)
-----------------
DNA (825bp)
protein (275aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATD0_9CLOT
hypothetical protein
DolZOral124_scaffold_1104_7
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6490..7740)
-----------------
DNA (1251bp)
protein (417aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWL8_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20833.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
DolZOral124_scaffold_1104_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7790..9181)
-----------------
DNA (1392bp)
protein (464aa)
Glycine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00253}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00253};; Glycyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00253}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF
Glycine--tRNA ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=SYG_ALKOO
glycyl-tRNA synthetase
DolZOral124_scaffold_1104_9
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9337..10464
-----------------
DNA (1128bp)
protein (376aa)
Capsule synthesis protein, CapA n=3 Tax=Thermoanaerobacter RepID=E1T0M1_THESX
capsule synthesis protein CapA
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation)-like protein {ECO:0000313|EMBL:ABY93150.1}; Flags: Precursor;; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoan
DolZOral124_scaffold_1104_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10556..10960)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG79470.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
hypothetical protein
DolZOral124_scaffold_1104_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11115..12161)
-----------------
DNA (1047bp)
protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFT5_9FIRM
radical SAM enzyme, Cfr family
DolZOral124_scaffold_1104_12
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(12161..13099)
-----------------
DNA (939bp)
protein (313aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=2112565 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
D-isomer specific 2-hydroxyacid dehydrogenase Tax=GWB2_Clostridiales_37_7_curated
D-isomer specific 2-hydroxyacid dehydrogenase
DolZOral124_scaffold_1104_13
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13077..13532)
-----------------
DNA (456bp)
protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00030D83D8
hypothetical protein
DolZOral124_scaffold_1104_14
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13513..14013)
-----------------
DNA (501bp)
protein (167aa)
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000313|EMBL:AJQ27151.1}; EC=2.7.1.71 {ECO:0000313|EMBL:AJQ27151.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" s
Shikimate kinase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NWX3_9FIRM
DolZOral124_scaffold_1104_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14010..15065)
-----------------
DNA (1056bp)
protein (352aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9P9_9FIRM
DolZOral124_scaffold_1104_16
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15046..16308)
-----------------
DNA (1263bp)
protein (421aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; DAHP synthase/3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RMY6_9CLOT
DolZOral124_scaffold_1104_17
Candidatus Pelagibacter ubique, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16283..17338)
-----------------
DNA (1056bp)
protein (352aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=314261 species="Bacteria
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Pelagibacter ubique RepID=UPI0003687A1A
DolZOral124_scaffold_1104_18
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17319..18143)
-----------------
DNA (825bp)
protein (275aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHR6_CLOPA
DolZOral124_scaffold_1104_19
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18156..19592)
-----------------
DNA (1437bp)
protein (479aa)
Aminoacyl-histidine dipeptidase (Peptidase D) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVW2_9CLOT
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:KGG81302.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter az
aminoacyl-histidine dipeptidase
DolZOral124_scaffold_1104_20
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19592..20617)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KDR94946.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
Integral membrane protein LafC, accessory function in glycolipid and LTA synthesis
DolZOral124_scaffold_1104_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20614..21723)
-----------------
DNA (1110bp)
protein (370aa)
ugtP2; processive diacylglycerol glucosyltransferase UgtP (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CL98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99465.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
DolZOral124_scaffold_1104_22
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21877..22929)
-----------------
DNA (1053bp)
protein (351aa)
mnmA2; tRNA-specific 2-thiouridylase mnmA 2 (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriac
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E298_9FIRM
DolZOral124_scaffold_1104_23
Fusobacterium sp. CM1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(22936..23901)
-----------------
DNA (966bp)
protein (322aa)
Cysteine protease n=3 Tax=Fusobacterium nucleatum RepID=Q8RE46_FUSNN rbh
Papain family cysteine protease {ECO:0000313|EMBL:EUB42485.1}; TaxID=936561 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. CM1.;"
cysteine protease
DolZOral124_scaffold_1104_24
Fusobacterium sp. CM1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(23918..25675)
-----------------
DNA (1758bp)
protein (586aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-2 RepID=U7TBE9_FUSNU rbh
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:EUB42486.1}; TaxID=936561 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. CM1.;"
endonuclease
DolZOral124_scaffold_1104_25
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(25861..30342)
-----------------
DNA (4482bp)
protein (1494aa)
Lipoprotein with conserved repeat domains n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IBL5_PSYTT
lipoprotein with conserved repeat domains
Bacterial surface protein 26-residue repeat {ECO:0000313|EMBL:CEG00493.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostr
DolZOral124_scaffold_1104_26
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30626..31468)
-----------------
DNA (843bp)
protein (281aa)
Formate/nitrite transporter n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1S0_DESAJ
formate/nitrite transporter
Formate/nitrite transporter {ECO:0000313|EMBL:AFM39744.1}; Flags: Precursor;; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulf
DolZOral124_scaffold_1104_27
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31606..33339)
-----------------
DNA (1734bp)
protein (578aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUH5_9FIRM
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EHQ88993.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosin
ABC transporter
DolZOral124_scaffold_1104_28
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33339..35117)
-----------------
DNA (1779bp)
protein (593aa)
Lipid A ABC transport system ATP-binding protein MsbA1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBA7_ACEWD
msbA1; lipid A ABC transport system ATP-binding protein MsbA1
Lipid A ABC transport system ATP-binding protein MsbA1 {ECO:0000313|EMBL:AFA47659.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="A
DolZOral124_scaffold_1104_29
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35127..35927)
-----------------
DNA (801bp)
protein (267aa)
Methyltransferase type 11 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8A3_ATOPD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACV51693.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain
DolZOral124_scaffold_1104_30
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35917..36522)
-----------------
DNA (606bp)
protein (202aa)
Transcriptional regulator, TetR family n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R5M2_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EIC94980.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanae
hypothetical protein
Displaying items 1-30 of 34 in total

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