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DolZOral124_scaffold_1300

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1300_1
unknown

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3..206
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

DolZOral124_scaffold_1300_2
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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422..1537
-----------------
DNA (1116bp)
protein (372aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
gcvT; glycine cleavage system T protein (EC:2.1.2.10)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003637834
DolZOral124_scaffold_1300_3
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1555..3855
-----------------
DNA (2301bp)
protein (767aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T1_SPISS rbh
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ADK81838.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" s
DolZOral124_scaffold_1300_4
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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3858..4670
-----------------
DNA (813bp)
protein (271aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9P6_9DELT
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=BJP_IG2069_Desfulfarculales_53_13
DolZOral124_scaffold_1300_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4664..5149
-----------------
DNA (486bp)
protein (162aa)
Carbon-monoxide dehydrogenase small subunit n=2 Tax=Clostridium bolteae RepID=R0BB13_9CLOT
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:ENZ53283.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
DolZOral124_scaffold_1300_6
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(5159..6208)
-----------------
DNA (1050bp)
protein (350aa)
Putative sugar ABC transporter periplasmic sugar-binding protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N2V3_9FIRM
Putative sugar ABC transporter periplasmic sugar-binding protein {ECO:0000313|EMBL:CDF07794.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:9
hypothetical protein
DolZOral124_scaffold_1300_7
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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6347..7333
-----------------
DNA (987bp)
protein (329aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000313|EMBL:ADK81835.1}; EC=2.1.3.3 {ECO:0000313|EMBL:ADK81835.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" s
Ornithine carbamoyltransferase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8S8_SPISS rbh
DolZOral124_scaffold_1300_8
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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7356..8543
-----------------
DNA (1188bp)
protein (396aa)
Putative selenium metabolism hydrolase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CGJ8_9FIRM
Putative selenium metabolism hydrolase {ECO:0000313|EMBL:ERI89634.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F054
peptidase M20 family protein
DolZOral124_scaffold_1300_9
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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8566..9654
-----------------
DNA (1089bp)
protein (363aa)
Dihydroorotate dehydrogenase family protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T3_SPISS rbh
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase family protein {ECO:0000313|EMBL:ADK81840.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae
DolZOral124_scaffold_1300_10
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9661..10587)
-----------------
DNA (927bp)
protein (309aa)
ABC transporter permease n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003637AC2 rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADK80188.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 112
DolZOral124_scaffold_1300_11
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10584..11639)
-----------------
DNA (1056bp)
protein (352aa)
Inner-membrane translocator n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R0T8_SPISS
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADK80187.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdi
DolZOral124_scaffold_1300_12
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11648..12619)
-----------------
DNA (972bp)
protein (324aa)
Basic membrane lipoprotein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R0T7_SPISS
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ADK80186.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdin
DolZOral124_scaffold_1300_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12831..14147
-----------------
DNA (1317bp)
protein (439aa)
Putative S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:CCK94498.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CCK94498.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
putative S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Putative S-adenosylhomocysteine deaminase n=1 Tax=Clostridium difficile CD002 RepID=U3W1D5_CLODI rbh
DolZOral124_scaffold_1300_14
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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14286..15020
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037B21DA
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADK80746.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (str
DolZOral124_scaffold_1300_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15017..16429
-----------------
DNA (1413bp)
protein (471aa)
Carbohydrate kinase, FGGY n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5Y2_SPISS rbh
carbohydrate kinase FGGY
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ADK80747.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293
DolZOral124_scaffold_1300_16
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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16443..17210
-----------------
DNA (768bp)
protein (256aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ADK80748.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ADK80748.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;"
Fructose-bisphosphate aldolase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5Y3_SPISS
DolZOral124_scaffold_1300_17
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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17207..18238
-----------------
DNA (1032bp)
protein (344aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000376F71A rbh
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADK80749.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smara
DolZOral124_scaffold_1300_18
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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18257..19618
-----------------
DNA (1362bp)
protein (454aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003675E7E rbh
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADK80750.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Sp
DolZOral124_scaffold_1300_19
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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19639..20562
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00035D972A rbh
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADK80751.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source
DolZOral124_scaffold_1300_20
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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20559..21389
-----------------
DNA (831bp)
protein (277aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5Y7_SPISS rbh
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADK80752.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source
DolZOral124_scaffold_1300_21
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(21408..22484)
-----------------
DNA (1077bp)
protein (359aa)
glutamyl aminopeptidase (EC:3.4.11.7)
Glutamyl aminopeptidase {ECO:0000313|EMBL:ADK79191.1}; EC=3.4.11.7 {ECO:0000313|EMBL:ADK79191.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source=
Glutamyl aminopeptidase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R6Q9_SPISS rbh
DolZOral124_scaffold_1300_22
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22700..23179
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XM12_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC21699.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
DolZOral124_scaffold_1300_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23196..23669)
-----------------
DNA (474bp)
protein (158aa)
Hydrolase NUDIX family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T618_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ60988.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
NUDIX hydrolase
DolZOral124_scaffold_1300_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(23725..24606)
-----------------
DNA (882bp)
protein (294aa)
UPF0042 nucleotide-binding protein O163_00600 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CT57_THEYO
hypothetical protein
Nucleotide-binding protein O163_00600 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" s
DolZOral124_scaffold_1300_25
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24603..25640)
-----------------
DNA (1038bp)
protein (346aa)
sugar ABC transporter ATP-binding protein n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000287A8AD
Putative multiple sugar-binding transport ATP-binding protein {ECO:0000313|EMBL:EAU51991.1}; TaxID=367336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacter
ABC transporter
DolZOral124_scaffold_1300_26
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25705..26925)
-----------------
DNA (1221bp)
protein (407aa)
iron ABC transporter substrate-binding protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00037F268E
Uncharacterized protein {ECO:0000313|EMBL:EAU51990.1}; TaxID=367336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium HTCC2255.;"
iron ABC transporter periplasmic protein
DolZOral124_scaffold_1300_27
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26977..28794)
-----------------
DNA (1818bp)
protein (606aa)
Putative ABC transporter permease protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FCQ7_9RHOB
Putative ABC transporter permease protein {ECO:0000313|EMBL:EAU51992.1}; TaxID=367336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium HTCC2
binding-protein-dependent transporters inner membrane component
DolZOral124_scaffold_1300_28
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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29114..30220
-----------------
DNA (1107bp)
protein (369aa)
kinase, pfkB family; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Kinase, pfkB family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF67_9BACT
kinase, pfkB family
DolZOral124_scaffold_1300_29
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(30256..31062)
-----------------
DNA (807bp)
protein (269aa)
surE; 5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=926569 spec
5'-nucleotidase SurE n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2S5_ANATU
DolZOral124_scaffold_1300_30

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comp(31079..32173)
-----------------
DNA (1095bp)
protein (365aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5S5_ANATU
Marine sediment metagenome DNA, contig: S06H3_L00023 {ECO:0000313|EMBL:GAI17520.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NAD-dependent epimerase/dehydratase family protein
Displaying items 1-30 of 56 in total

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