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DolZOral124_scaffold_1426

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1426_1
unknown

Not on your lists

2..91
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

DolZOral124_scaffold_1426_2
unknown

Not on your lists

289..825
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

DolZOral124_scaffold_1426_3
unknown

Not on your lists

857..967
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

DolZOral124_scaffold_1426_4
unknown

Not on your lists

1048..1224
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

DolZOral124_scaffold_1426_5
unknown

Not on your lists

1237..1464
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

DolZOral124_scaffold_1426_6
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1547..2383)
-----------------
DNA (837bp)
protein (279aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N971_9GAMM rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EEV88848.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Ca
hypothetical protein
DolZOral124_scaffold_1426_7
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2394..3191)
-----------------
DNA (798bp)
protein (266aa)
PTS system, mannose/fructose/sorbose family, IIC component n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N972_9GAMM rbh
PTS system, mannose/fructose/sorbose family, IIC component {ECO:0000313|EMBL:EEV88849.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Ca
PTS system mannose/fructose/sorbose family transporter subunit IIC
DolZOral124_scaffold_1426_8
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3195..4157)
-----------------
DNA (963bp)
protein (321aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EEV88850.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEV88850.1};; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteri
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N973_9GAMM rbh
PTS system mannose-specific transporter subunit IIAB
DolZOral124_scaffold_1426_9
Sulfurimonas denitrificans, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4428..5186
-----------------
DNA (759bp)
protein (253aa)
Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30Q90_SULDN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB44841.1}; TaxID=326298 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas
DolZOral124_scaffold_1426_10
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5346..6410)
-----------------
DNA (1065bp)
protein (355aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1304873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pas
Fe(3+) transport system ATP-binding protein AfuC n=6 Tax=Pasteurella multocida RepID=G7SRU7_PASMD
ABC transporter family protein
DolZOral124_scaffold_1426_11
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6443..8521)
-----------------
DNA (2079bp)
protein (693aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Histophilus somni (strain 2336) RepID=B0UT62_HISS2
Iron ABC transporter permease {ECO:0000313|EMBL:EXI62804.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia hae
binding-protein-dependent transporters inner membrane component
DolZOral124_scaffold_1426_12
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8601..9635)
-----------------
DNA (1035bp)
protein (345aa)
Extracellular solute-binding protein n=6 Tax=Aggregatibacter actinomycetemcomitans RepID=I1XTQ4_AGGAC
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:AFI87773.1}; TaxID=694569 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Agg
DolZOral124_scaffold_1426_13
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9650..10672)
-----------------
DNA (1023bp)
protein (341aa)
ABC transporter, solute-binding protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCH5_9GAMM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEV87671.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" so
hypothetical protein
DolZOral124_scaffold_1426_14
[Mannheimia] succiniciproducens, Basfia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11046..11282
-----------------
DNA (237bp)
protein (79aa)
50S ribosomal protein L28 n=2 Tax=Pasteurellaceae RepID=RL28_ACTSZ
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=221988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Basfia.;" source="Mannheimia succinic
DolZOral124_scaffold_1426_15
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11293..11463
-----------------
DNA (171bp)
protein (57aa)
50S ribosomal protein L33 n=3 Tax=Aliivibrio fischeri RepID=RL33_VIBF1
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=456298 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus pa
DolZOral124_scaffold_1426_16
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11555..13120
-----------------
DNA (1566bp)
protein (522aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis pro
Probable protein kinase UbiB n=1 Tax=Histophilus somni (strain 2336) RepID=B0UVD3_HISS2 rbh
2-polyprenylphenol 6-hydroxylase
DolZOral124_scaffold_1426_17
unknown

Not on your lists

13174..14028
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

DolZOral124_scaffold_1426_18
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14051..15004
-----------------
DNA (954bp)
protein (318aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Haemophilus parasuis serovar 5 (strain SH0165) RepID=MIAA_HAEPS
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
DolZOral124_scaffold_1426_19
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15092..15364
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI00035DC2EA
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source
hfq; RNA chaperone Hfq
DolZOral124_scaffold_1426_20
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15357..16388
-----------------
DNA (1032bp)
protein (344aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1432056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteur
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Pasteurella haemolytica RepID=S5F1M1_PASHA
ribosome biogenesis GTPase RsgA
DolZOral124_scaffold_1426_21
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16400..16954
-----------------
DNA (555bp)
protein (185aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:ABI25194.1}; EC=3.1.3.45 {ECO:0000313|EMBL:ABI25194.1};; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pas
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=2 Tax=Histophilus somni RepID=Q0I3E6_HISS1
DolZOral124_scaffold_1426_22
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

16978..17226
-----------------
DNA (249bp)
protein (83aa)
Putative uncharacterized protein n=1 Tax=Arcobacter sp. L RepID=G2HYC1_9PROT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK74124.1}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arco
DolZOral124_scaffold_1426_23
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17239..17619
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8EVM6_ARCB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV67999.1}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter bu
DolZOral124_scaffold_1426_24
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17751..19604)
-----------------
DNA (1854bp)
protein (618aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Haemophilus parasuis gx033 RepID=N1V6C8_HAEPR
DolZOral124_scaffold_1426_25
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19608..20417)
-----------------
DNA (810bp)
protein (270aa)
Inositol-1-monophosphatase n=16 Tax=Pasteurella haemolytica RepID=M4XLI0_PASHA
Inositol monophosphatase {ECO:0000313|EMBL:EXI62491.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolyt
inositol monophosphatase
DolZOral124_scaffold_1426_26
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20596..20859
-----------------
DNA (264bp)
protein (88aa)
50S ribosomal protein L31 type B n=11 Tax=Haemophilus parasuis RepID=RL31B_HAEPS
50S ribosomal protein L31 type B
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1275972 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae
DolZOral124_scaffold_1426_27
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20873..20998
-----------------
DNA (126bp)
protein (42aa)
50S ribosomal protein L36 n=2 Tax=Actinobacillus minor RepID=C5RZE0_9PAST
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actino
50S ribosomal protein L36 2
DolZOral124_scaffold_1426_28
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21150..22841)
-----------------
DNA (1692bp)
protein (564aa)
D-lactate dehydrogenase {ECO:0000256|PIRNR:PIRNR000101}; EC=1.1.1.28 {ECO:0000256|PIRNR:PIRNR000101};; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurella
D-lactate dehydrogenase n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NDC1_9PAST rbh
d-lactate dehydrogenase
DolZOral124_scaffold_1426_29
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22922..24466)
-----------------
DNA (1545bp)
protein (515aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GM50_9GAMM
sulfite reductase (NADPH) alpha subunit
Sulfite reductase (NADPH) alpha subunit {ECO:0000313|EMBL:AHG72295.1}; TaxID=1432056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mann
DolZOral124_scaffold_1426_30
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24535..24954)
-----------------
DNA (420bp)
protein (140aa)
PAS domain S-box protein n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NF76_9PAST
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:AKA10318.1}; TaxID=75985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolytica (Pas
Displaying items 1-30 of 42 in total

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