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DolZOral124_scaffold_1450

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1450_1
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..370
-----------------
DNA (369bp)
protein (123aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; A
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Reinekea blandensis MED297 RepID=A4BCJ3_9GAMM
DolZOral124_scaffold_1450_2
unknown

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454..1038
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

DolZOral124_scaffold_1450_3
unknown

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comp(1035..2162)
-----------------
DNA (1128bp)
protein (376aa)

This feature has no annotations

DolZOral124_scaffold_1450_4
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2382..2708
-----------------
DNA (327bp)
protein (109aa)
Putative fimbrial chaperone protein n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6FFZ5_AVIPA
Molecular chaperone {ECO:0000313|EMBL:KKB01879.1}; TaxID=728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Avibacterium.;" source="Avibacterium paragallinaru
fimB1; pili assembly chaperone
DolZOral124_scaffold_1450_5
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2665..5235
-----------------
DNA (2571bp)
protein (857aa)
F17-like fimbrial usher n=2 Tax=Escherichia coli RepID=S0YCP7_ECOLX rbh
Fimbrial usher protein {ECO:0000313|EMBL:CDZ86666.1}; Flags: Precursor;; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source=
F17-like fimbrial usher
DolZOral124_scaffold_1450_6
Neisseria shayeganii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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5232..7013
-----------------
DNA (1782bp)
protein (594aa)
O-antigen polymerase superfamily protein n=1 Tax=Neisseria shayeganii 871 RepID=G4CKR0_9NEIS rbh
O-antigen polymerase superfamily protein {ECO:0000313|EMBL:EGY51593.1}; TaxID=1032488 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria
hypothetical protein
DolZOral124_scaffold_1450_7
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7111..8073)
-----------------
DNA (963bp)
protein (321aa)
Phospahte starvation induced protein PhoH n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EXA6_DICNV
phoH; phospahte starvation induced protein PhoH
Phospahte starvation induced protein PhoH {ECO:0000313|EMBL:ABQ13911.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" so
DolZOral124_scaffold_1450_8
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8172..9347)
-----------------
DNA (1176bp)
protein (392aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1268239 species="Bacteria; Proteobacteria; Gammapr
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Pseudoalteromonas luteoviolacea B = ATCC 29581 RepID=L8D9C0_9GAMM
DolZOral124_scaffold_1450_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9433..10275)
-----------------
DNA (843bp)
protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKF4_9GAMM
panthothenate synthetase
DolZOral124_scaffold_1450_trna_5
unknown

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comp(10394..10467)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1450_trna_4
unknown

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comp(10569..10642)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1450_trna_3
unknown

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comp(10660..10732)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1450_trna_2
unknown

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comp(10762..10835)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1450_trna_1
unknown

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comp(10855..10927)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1450_10
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11135..12322)
-----------------
DNA (1188bp)
protein (396aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EEY73259.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EEY73259.1};; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Gri
Aromatic-amino-acid transaminase (EC:2.6.1.57)
Aspartate aminotransferase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5U5_GRIHO rbh
DolZOral124_scaffold_1450_11
unknown

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comp(12341..12994)
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

DolZOral124_scaffold_1450_12
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13190..13642)
-----------------
DNA (453bp)
protein (151aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
ribonuclease H (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Microbulbifer variabilis RepID=UPI00036E90A8
DolZOral124_scaffold_1450_13
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13630..14463)
-----------------
DNA (834bp)
protein (278aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=119823
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UGV2_9GAMM
Phosphatidylserine decarboxylase
DolZOral124_scaffold_1450_14
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14507..14989
-----------------
DNA (483bp)
protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacte
cytidine deaminase n=1 Tax=Thioalkalivibrio sp. HL-Eb18 RepID=UPI0003700CBB
cytosine/adenosine deaminase
DolZOral124_scaffold_1450_15
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15095..16234
-----------------
DNA (1140bp)
protein (380aa)
UPI0003D31CD3 related cluster n=1 Tax=unknown RepID=UPI0003D31CD3 rbh
Sugar transporter {ECO:0000313|EMBL:KJF99862.1}; TaxID=553611 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium leiognathi.;"
polysaccharide export protein GfcE
DolZOral124_scaffold_1450_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16344..16775
-----------------
DNA (432bp)
protein (144aa)
wzb; low molecular weight phosphotyrosine protein phosphatase (EC:3.1.3.48)
protein-tyrosine phosphatase n=1 Tax=Klebsiella pneumoniae RepID=UPI00036065F8
Putative alkaline phosphatase Wzb {ECO:0000313|EMBL:BAF75754.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiel
DolZOral124_scaffold_1450_17
Vibrionales bacterium SWAT-3, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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16782..18935
-----------------
DNA (2154bp)
protein (718aa)
tyrosine-protein kinase (EC:2.7.10.2)
tyrosine protein kinase n=1 Tax=Vibrio kanaloae RepID=UPI000300489F
Putative tyrosine-protein kinase Wzc {ECO:0000313|EMBL:EDK29043.1}; TaxID=391574 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; unclassified Vibrionales.;" source="Vibrionales ba
DolZOral124_scaffold_1450_18
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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19039..19338
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=2 Tax=Vibrio tubiashii RepID=F9T6Z8_9VIBR
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AIW16624.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
DolZOral124_scaffold_1450_19
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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19430..20461
-----------------
DNA (1032bp)
protein (344aa)
mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIK3_NEPCE
Hydroxymethylglutaryl-CoA reductase (NADPH) {ECO:0000313|EMBL:EAR60272.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibac
DolZOral124_scaffold_1450_20
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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20461..21504
-----------------
DNA (1044bp)
protein (348aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphat
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00037B83BA
DolZOral124_scaffold_1450_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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21898..23085
-----------------
DNA (1188bp)
protein (396aa)
Hydroxymethylglutaryl-coenzyme A synthase n=1 Tax=Osedax symbiont Rs2 RepID=S6HPZ0_9GAMM rbh
Hydroxymethylglutaryl-coenzyme A synthase {ECO:0000313|EMBL:EPJ53841.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" sou
hydroxymethylglutaryl-CoA synthase
DolZOral124_scaffold_1450_22
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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23054..24151
-----------------
DNA (1098bp)
protein (366aa)
GHMP kinase protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZBR4_9GAMM
Mevalonate kinase {ECO:0000313|EMBL:KCV81751.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanti
GHMP kinase family protein
DolZOral124_scaffold_1450_23
unknown

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24241..24738
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

DolZOral124_scaffold_1450_24
unknown

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24735..25097
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

DolZOral124_scaffold_1450_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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25094..25423
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DVR3_PSEMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB59903.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendo
Displaying items 1-30 of 39 in total

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