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DolZOral124_scaffold_1661

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1661_1
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(276..821)
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003689AB7
membrane protein
Membrane protein {ECO:0000313|EMBL:EAR00424.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC217
DolZOral124_scaffold_1661_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1069..1971)
-----------------
DNA (903bp)
protein (301aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SFE8_HAHCH
Conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73672.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira s
DolZOral124_scaffold_1661_3
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2120..3700)
-----------------
DNA (1581bp)
protein (527aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCU5_9GAMM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEV87570.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardioba
oligopeptide transport protein
DolZOral124_scaffold_1661_4
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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3983..4900
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035E6E5C
oligopeptide transporter permease protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43708.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
DolZOral124_scaffold_1661_5
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4913..5803
-----------------
DNA (891bp)
protein (297aa)
ABC transporter, permease protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCU7_9GAMM
ABC transporter, permease protein {ECO:0000313|EMBL:EEV87572.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="
oligopeptide transporter permease protein
DolZOral124_scaffold_1661_6
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5815..7485
-----------------
DNA (1671bp)
protein (557aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCU8_9GAMM
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EEV87573.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobact
ABC transporter, ATP-binding protein
DolZOral124_scaffold_1661_7
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7781..9460
-----------------
DNA (1680bp)
protein (560aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=
beta3; Choline dehydrogenase (EC:1.1.99.1)
choline dehydrogenase n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI000375FED9 rbh
DolZOral124_scaffold_1661_8
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9489..11495
-----------------
DNA (2007bp)
protein (669aa)
Choline/carnitine/betaine transporter n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DZR8_9GAMM
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EGV31957.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorh
BCCT family choline/carnitine/betaine transporter
DolZOral124_scaffold_1661_9
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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11772..12788
-----------------
DNA (1017bp)
protein (339aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=11 Tax=Vibrio nigripulchritudo RepID=U4KCX2_9VIBR rbh
putative TRAP-type C4-dicarboxylate transport system, periplasmic component
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CCO60748.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae
DolZOral124_scaffold_1661_10
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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12920..13471
-----------------
DNA (552bp)
protein (184aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Vibrio marinus RepID=UPI00036C212C
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KKD01739.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photo
TRAP dicarboxylate transporter subunit DctQ
DolZOral124_scaffold_1661_11
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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13464..14786
-----------------
DNA (1323bp)
protein (441aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Vibrio rumoiensis RepID=UPI0002E35F47
putative TRAP-type C4-dicarboxylate transport system, large permease component
Putative TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CCO60746.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionac
DolZOral124_scaffold_1661_12
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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14786..15286
-----------------
DNA (501bp)
protein (167aa)
Thermoresistant gluconokinase n=2 Tax=Vibrio tubiashii RepID=F9T3A7_9VIBR
gluconate kinase
Gluconate kinase {ECO:0000313|EMBL:AIW15878.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
DolZOral124_scaffold_1661_13
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15461..16864
-----------------
DNA (1404bp)
protein (468aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphing
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZT5_HALH1 rbh
6-phosphogluconate dehydrogenase
DolZOral124_scaffold_1661_14
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16989..18209)
-----------------
DNA (1221bp)
protein (407aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Tryptophan synthase beta chain n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QEC1_PSYCK rbh
tryptophan synthase subunit beta
DolZOral124_scaffold_1661_15
unknown

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comp(18258..18536)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

DolZOral124_scaffold_1661_16
Idiomarina loihiensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19069..19272
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized conserved membrane or secreted protein n=2 Tax=Idiomarina loihiensis RepID=Q5QYR0_IDILO
hypothetical protein
Uncharacterized conserved membrane or secreted protein {ECO:0000313|EMBL:AAV81883.1}; TaxID=283942 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;
DolZOral124_scaffold_1661_17
Campylobacter concisus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

19358..20047
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Campylobacter concisus UNSW3 RepID=U2GCA8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ERJ23623.1}; TaxID=1242966 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campyloba
DolZOral124_scaffold_1661_18
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20131..20385
-----------------
DNA (255bp)
protein (85aa)
Putative Glutaredoxin-related protein n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6EPY7_AVIPA
Uncharacterized protein {ECO:0000313|EMBL:KKB01285.1}; TaxID=728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Avibacterium.;" source="Avibacterium paragalli
glutaredoxin-like protein
DolZOral124_scaffold_1661_19
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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20400..21914
-----------------
DNA (1515bp)
protein (505aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FC26_9GAMM
lysS; lysyl-tRNA synthetase
DolZOral124_scaffold_1661_20
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

21924..23867
-----------------
DNA (1944bp)
protein (648aa)
ABC transporter ATP-binding protein n=1 Tax=Sulfurovum sp. AR RepID=I2K9J7_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIF51899.1}; TaxID=1165841 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
ABC transporter ATP-binding protein
DolZOral124_scaffold_1661_21
unknown

Not on your lists

23975..24496
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

DolZOral124_scaffold_1661_22
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24775..26001)
-----------------
DNA (1227bp)
protein (409aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000255|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000255|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00005}; TaxID=400668 species="Bacte
Argininosuccinate synthase n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=ASSY_MARMS
DolZOral124_scaffold_1661_23
Aliivibrio fischeri, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26186..27598
-----------------
DNA (1413bp)
protein (471aa)
multidrug transporter MatE n=1 Tax=Aliivibrio logei RepID=UPI0003032B74
sodium-driven multidrug efflux pump
Sodium-driven multidrug efflux pump {ECO:0000313|EMBL:AAW85947.1}; TaxID=312309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio.;" source="Vibrio fischeri
DolZOral124_scaffold_1661_24
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27847..28860)
-----------------
DNA (1014bp)
protein (338aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JMS5_9GAMM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EKE75712.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
DolZOral124_scaffold_1661_25

Not on your lists

comp(29006..29779)
-----------------
DNA (774bp)
protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium AST2 RepID=R9UQK8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGN70910.1}; TaxID=1328261 species="Bacteria; environmental samples.;" source="uncultured bacterium AST2.;"
Sulfite exporter TauE/SafE
DolZOral124_scaffold_1661_26
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

29967..31334
-----------------
DNA (1368bp)
protein (456aa)
Uracil-xanthine permease n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V0W7_ARCNC
uracil-xanthine permease
Uracil-xanthine permease {ECO:0000313|EMBL:ADG93929.1}; TaxID=572480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter n
DolZOral124_scaffold_1661_27
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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31393..31590
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1P225_9NEIS
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
membrane protein
DolZOral124_scaffold_1661_28
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31664..33034
-----------------
DNA (1371bp)
protein (457aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UGB7_9BURK
DolZOral124_scaffold_1661_29
Idiomarina baltica, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33367..34164
-----------------
DNA (798bp)
protein (266aa)
SAM-dependent methyltransferase n=1 Tax=Idiomarina baltica OS145 RepID=A3WL61_9GAMM
SAM-dependent methyltransferase {ECO:0000313|EMBL:EAQ32414.1}; TaxID=314276 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina ba
type 11 methyltransferase
DolZOral124_scaffold_1661_30
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(34174..34638)
-----------------
DNA (465bp)
protein (155aa)
UvrABC system protein B n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYD3_9GAMM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
Displaying 30 items

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