ggKbase home page

DolZOral124_scaffold_1698

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1698_1
bacterium UASB270, Bacteria

Not on your lists

comp(35..2023)
-----------------
DNA (1989bp)
protein (663aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFN5_DESAA
Uncharacterized protein {ECO:0000313|EMBL:GAK57788.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
DolZOral124_scaffold_1698_2
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2263..2595
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TPY2_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR39257.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococc
hypothetical protein
DolZOral124_scaffold_1698_3
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2657..4384
-----------------
DNA (1728bp)
protein (576aa)
Ribocuclease J n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQL7_DESML rbh
Ribocuclease J {ECO:0000313|EMBL:EPR39256.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multiv
ribonuclease J 1
DolZOral124_scaffold_1698_4
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4555..6405
-----------------
DNA (1851bp)
protein (617aa)
Formate--tetrahydrofolate ligase {ECO:0000255|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000255|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000255|HAMAP-Rule:MF_01543}; Short=FHS {ECO:0
Formate--tetrahydrofolate ligase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=FTHS_DESAA rbh
formate--tetrahydrofolate ligase
DolZOral124_scaffold_1698_5
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6450..7394
-----------------
DNA (945bp)
protein (315aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U6M3_DESML
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desul
DolZOral124_scaffold_1698_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7446..7862
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQW1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47203.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
DolZOral124_scaffold_1698_7
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8076..9644
-----------------
DNA (1569bp)
protein (523aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z238_DESAT rbh
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADH85613.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.
DolZOral124_scaffold_1698_8

Not on your lists

9741..10544
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CIN5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN07098.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolZOral124_scaffold_1698_9
unknown

Not on your lists

comp(10818..11144)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

DolZOral124_scaffold_1698_10
Rickettsiella grylli, Rickettsiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11179..11427)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PND5_9COXI
Uncharacterized protein {ECO:0000313|EMBL:EDP46637.1}; TaxID=59196 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Rickettsiella.;" source="Rickettsiella grylli.;"
hypothetical cytosolic protein
DolZOral124_scaffold_1698_11
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11825..12556
-----------------
DNA (732bp)
protein (244aa)
Helix-turn-helix transcriptional regulator, UTRA domain-containing, GntR family id=4183600 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=GWC2_Pelobacteraceae_58_13_curated
GntR family transcriptional regulator
DolZOral124_scaffold_1698_12
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12549..13775
-----------------
DNA (1227bp)
protein (409aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterale
Tryptophan synthase beta chain id=4183602 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
trpB1; tryptophan synthase subunit beta
DolZOral124_scaffold_1698_13
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13768..14529
-----------------
DNA (762bp)
protein (254aa)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadal
Tryptophan synthase alpha chain n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=TRPA_PELCD rbh
trpA; tryptophan synthase subunit alpha
DolZOral124_scaffold_1698_14
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14636..15133)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1P9_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KHD05701.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
DolZOral124_scaffold_1698_15
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15130..16236)
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KF00_CYAP7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK70456.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
DolZOral124_scaffold_1698_16
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16650..18170)
-----------------
DNA (1521bp)
protein (507aa)
Predicted Na(+)-dicarboxylate cotransporter (Solute carrier family 13 protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QJP0_DESAH
Na(+)-dicarboxylate cotransporter
Predicted Na(+)-dicarboxylate cotransporter (Solute carrier family 13 protein) {ECO:0000313|EMBL:ACN13893.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; De
DolZOral124_scaffold_1698_17
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18270..20288)
-----------------
DNA (2019bp)
protein (673aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q3C4_9DELT
Peptidylprolyl isomerase
Tax=CG_Delta_05
DolZOral124_scaffold_1698_18
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20342..21226)
-----------------
DNA (885bp)
protein (295aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U0T5_DESML rbh
DolZOral124_scaffold_1698_19
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(21361..22896)
-----------------
DNA (1536bp)
protein (512aa)
Sigma-54 factor, interaction domain-containing protein id=3840671 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
sigma-54 factor interaction domain-containing protein Tax=GWC2_Nitrospirae_56_14_curated
sigma-54-dependent transcriptional regulator
DolZOral124_scaffold_1698_20
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22915..23445)
-----------------
DNA (531bp)
protein (177aa)
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14254.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
membrane protein
rhomboid family protein id=16860 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
DolZOral124_scaffold_1698_21
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23646..24581
-----------------
DNA (936bp)
protein (312aa)
Exopolyphosphatase-like protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7VK54_DESML rbh
Exopolyphosphatase-like protein {ECO:0000313|EMBL:EPR44948.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Des
exopolyphosphatase-like protein
DolZOral124_scaffold_1698_22
unknown

Not on your lists

comp(24578..24730)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

DolZOral124_scaffold_1698_23
unknown

Not on your lists

comp(24721..24972)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

DolZOral124_scaffold_1698_24
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25140..27578
-----------------
DNA (2439bp)
protein (813aa)
Cell division FtsK/SpoIIIE n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TRH7_DESML
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:EPR39255.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfoc
cell division protein FtsK/SpoIIIE
DolZOral124_scaffold_1698_trna_1
unknown

Not on your lists

27650..27721
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1698_25
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27739..28359)
-----------------
DNA (621bp)
protein (207aa)
Methylated-DNA--protein-cysteine methyltransferase Ogt {ECO:0000313|EMBL:KDR95850.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KDR95850.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales
methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BZW2_DESAD
DolZOral124_scaffold_1698_26
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29074..30069
-----------------
DNA (996bp)
protein (332aa)
RNA polymerase sigma factor n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TBQ4_DESML
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desul
RNA polymerase sigma 70 family subunit
DolZOral124_scaffold_1698_27
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30076..31923
-----------------
DNA (1848bp)
protein (616aa)
Tetratricopeptide repeat-containing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TBY7_DESML rbh
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:EPR34055.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;"
TPR repeat protein
DolZOral124_scaffold_1698_28
unknown

Not on your lists

31965..32675
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

DolZOral124_scaffold_1698_29
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32672..33883
-----------------
DNA (1212bp)
protein (404aa)
Phosphohydrolase-associated domain containing protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TAA5_DESML
Phosphohydrolase {ECO:0000313|EMBL:KJS29089.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp
metal-dependent phosphohydrolase
Displaying items 1-30 of 31 in total

View Taxonomy