ggKbase home page

DolZOral124_scaffold_1709

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1709_1
unknown

Not on your lists

1..321
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

DolZOral124_scaffold_1709_2
unknown

Not on your lists

318..698
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

DolZOral124_scaffold_1709_3
Anaerococcus lactolyticus, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

812..1186
-----------------
DNA (375bp)
protein (125aa)
GntR family transcriptional regulator n=1 Tax=Anaerococcus sp. PH9 RepID=UPI000318CA7B
GntR family transcriptional regulator {ECO:0000313|EMBL:KGF05782.1}; TaxID=1284686 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus lact
GntR family transcriptional regulator
DolZOral124_scaffold_1709_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1173..1865
-----------------
DNA (693bp)
protein (231aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5K1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFW06502.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Copro
ABC transporter
DolZOral124_scaffold_1709_5
unknown

Not on your lists

1867..2742
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

DolZOral124_scaffold_1709_6
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2861..4063
-----------------
DNA (1203bp)
protein (401aa)
Anaerobic nitric oxide reductase flavorubredoxin NorV n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VTC7_CLOSH
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:GAE90508.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium]
flavoprotein
DolZOral124_scaffold_1709_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4218..6065
-----------------
DNA (1848bp)
protein (616aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJZ2_ALKMQ
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ABR46510.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus meta
DolZOral124_scaffold_1709_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6065..7120
-----------------
DNA (1056bp)
protein (352aa)
Chain length determinant protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R9X7_9THEO
Capsular polysaccharide biosynthesis {ECO:0000313|EMBL:KKC30299.1}; Chain length determinant protein {ECO:0000313|EMBL:EEB75277.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaero
capsular polysaccharide biosynthesis protein-like protein
DolZOral124_scaffold_1709_9
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

7149..7595
-----------------
DNA (447bp)
protein (149aa)
Small multi-drug export protein id=3789728 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
putative small multi-drug export Tax=GWC2_Clostridiales_40_7_curated
small multi-drug export
DolZOral124_scaffold_1709_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7604..7936)
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYC2_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS78249.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
DolZOral124_scaffold_1709_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8117..11638
-----------------
DNA (3522bp)
protein (1174aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
por1; pyruvate:ferredoxin oxidoreductase Por (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUU4_9CLOT
DolZOral124_scaffold_1709_12
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11803..13167
-----------------
DNA (1365bp)
protein (455aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI000308ECB1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI40089.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain
DolZOral124_scaffold_1709_13
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13176..13865
-----------------
DNA (690bp)
protein (230aa)
PhoP family transcriptional regulator n=1 Tax=Paenibacillus sp. A9 RepID=UPI00036A771E
winged helix family two component transcriptional regulator
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:EGG38725.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp.
DolZOral124_scaffold_1709_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13872..15284
-----------------
DNA (1413bp)
protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacte
phoR_7; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
histidine kinase n=1 Tax=Brevibacillus laterosporus RepID=UPI00037D1EED
DolZOral124_scaffold_1709_15

Not on your lists

15465..17432
-----------------
DNA (1968bp)
protein (656aa)
Signal transduction histidine kinase n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6YYA4_9ALTE
Marine sediment metagenome DNA, contig: S01H1_S12720 {ECO:0000313|EMBL:GAG12403.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sensor signal transduction histidine kinase
DolZOral124_scaffold_1709_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17469..18089
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJN6_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW20018.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
DolZOral124_scaffold_1709_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18099..20789
-----------------
DNA (2691bp)
protein (897aa)
Protein translocase subunit SecA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CNW9_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaeroba
secA; preprotein translocase subunit SecA
DolZOral124_scaffold_1709_18
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20894..21937
-----------------
DNA (1044bp)
protein (348aa)
Peptide chain release factor 2 n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W6C2_CLOBI
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia;
PrfB; protein chain release factor B
DolZOral124_scaffold_1709_19
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22197..22859
-----------------
DNA (663bp)
protein (221aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.9)
Butyrate--acetoacetate CoA-transferase subunit A n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQ73_FUSVA
Branched-chain amino acid dehydrogenase {ECO:0000313|EMBL:KGG79840.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerob
DolZOral124_scaffold_1709_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22852..23511
-----------------
DNA (660bp)
protein (220aa)
Putative acyloate-acetoacetate CoA-transferase {ECO:0000313|EMBL:CCQ94698.1}; EC=2.8.3.- {ECO:0000313|EMBL:CCQ94698.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
3-oxoacid CoA-transferase subunit B (EC:2.8.3.9)
Putative acyloate-acetoacetate CoA-transferase n=1 Tax=Clostridium ultunense Esp RepID=M1ZAK9_9CLOT
DolZOral124_scaffold_1709_21
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23521..23766
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWX2_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KDR94809.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
hypothetical protein
DolZOral124_scaffold_1709_22

Not on your lists

23754..24155
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein id=88604 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25463.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
DolZOral124_scaffold_1709_23

Not on your lists

24159..24821
-----------------
DNA (663bp)
protein (221aa)
ATP synthase subunit a n=1 Tax=uncultured bacterium RepID=K2FUG6_9BACT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
ATP synthase F0 subunit A
DolZOral124_scaffold_1709_24

Not on your lists

24831..25424
-----------------
DNA (594bp)
protein (198aa)
ATP synthase F0, C subunit id=88606 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATP synthase F0 subunit chi
DolZOral124_scaffold_1709_25

Not on your lists

25447..25731
-----------------
DNA (285bp)
protein (95aa)
F0F1 ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=88605 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25460.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
F0F1 ATP synthase subunit C
DolZOral124_scaffold_1709_26
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25760..26299
-----------------
DNA (540bp)
protein (180aa)
ATP synthase subunit b n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ATPF_ALKOO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase F0 subunit B
DolZOral124_scaffold_1709_27
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26287..26829
-----------------
DNA (543bp)
protein (181aa)
ATP synthase subunit delta, sodium ion specific n=1 Tax=Clostridium paradoxum RepID=ATPD_CLOPD
atpH; ATP synthase subunit delta, sodium ion specific
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
DolZOral124_scaffold_1709_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26861..28417
-----------------
DNA (1557bp)
protein (519aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=ATPA_ALKOO
DolZOral124_scaffold_1709_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28427..29332
-----------------
DNA (906bp)
protein (302aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJW0_ALKOO
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=8402
DolZOral124_scaffold_1709_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29356..30747
-----------------
DNA (1392bp)
protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS25_9CLOT
Displaying items 1-30 of 62 in total

View Taxonomy