ggKbase home page

DolZOral124_scaffold_1846

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1846_1
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..738
-----------------
DNA (738bp)
protein (246aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; envi
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IUQ6_9FIRM
putative CheA signal transduction histidine kinase
DolZOral124_scaffold_1846_2
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

752..1186
-----------------
DNA (435bp)
protein (145aa)
CheW protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QFL1_9FIRM
CheW protein {ECO:0000313|EMBL:CCZ27470.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
Chemotaxis signal transduction protein
DolZOral124_scaffold_1846_3
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1191..1799
-----------------
DNA (609bp)
protein (203aa)
CheC, inhibitor of MCP methylation n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KND2_CLOPH
chemotaxis protein CheC
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1801..2286
-----------------
DNA (486bp)
protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiale
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASU3_9CLOT
DolZOral124_scaffold_1846_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2312..2668
-----------------
DNA (357bp)
protein (119aa)
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2692..3459
-----------------
DNA (768bp)
protein (256aa)
RNA polymerase sigma 28 subunit FliA/WhiG (EC:4.1.1.65)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:411 RepID=R7HUN7_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1846_7
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3507..4904
-----------------
DNA (1398bp)
protein (466aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XIE0_9FIRM
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1846_8
unknown

Not on your lists

4990..5292
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

DolZOral124_scaffold_1846_9
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5294..5752
-----------------
DNA (459bp)
protein (153aa)
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_10
unknown

Not on your lists

5895..6134
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

DolZOral124_scaffold_1846_11
unknown

Not on your lists

6127..6444
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

DolZOral124_scaffold_1846_12
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6515..7402
-----------------
DNA (888bp)
protein (296aa)
GTPase Era n=2 Tax=Bacteria RepID=B7AQ47_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samp
GTP-binding protein Era
DolZOral124_scaffold_1846_13
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7405..8853
-----------------
DNA (1449bp)
protein (483aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=411489 species="
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:264 RepID=R5K1K6_9CLOT
DolZOral124_scaffold_1846_14
unknown

Not on your lists

8878..9765
-----------------
DNA (888bp)
protein (296aa)

This feature has no annotations

DolZOral124_scaffold_1846_15
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9778..10350
-----------------
DNA (573bp)
protein (191aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Coprococcus RepID=D5HIN2_9FIRM
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10347..11051
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000365AEDD
sortase
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1846_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11061..12119
-----------------
DNA (1059bp)
protein (353aa)
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1846_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12191..13621
-----------------
DNA (1431bp)
protein (477aa)
Proline--tRNA ligase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JHM1_9CLOT
prolyl-tRNA synthetase, family I
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1846_19
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13874..14641
-----------------
DNA (768bp)
protein (256aa)
Flagellar basal-body rod protein FlgF id=1910215 bin=GWD2_Clostridiales_32_19 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
flagellar basal body rod protein
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_20
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14684..15490
-----------------
DNA (807bp)
protein (269aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1X4_CLOCD
flagellar basal-body rod protein FlgG
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1846_21
unknown

Not on your lists

15535..15909
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

DolZOral124_scaffold_1846_22
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15869..16840
-----------------
DNA (972bp)
protein (324aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1STK3_PSYIN
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABM02818.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychr
DolZOral124_scaffold_1846_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16955..17398)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J979_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ83556.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein of unknown function DUF606
DolZOral124_scaffold_1846_24
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17406..17828)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VTQ3_CLOBI
Membrane protein {ECO:0000313|EMBL:KEZ88154.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
DolZOral124_scaffold_1846_25
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

17917..19092
-----------------
DNA (1176bp)
protein (392aa)
Malate dehydrogenase protein {ECO:0000313|EMBL:ERJ12595.1}; EC=1.1.1.38 {ECO:0000313|EMBL:ERJ12595.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Halopl
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Malate dehydrogenase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PSZ3_9BACT
DolZOral124_scaffold_1846_26
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19401..21377
-----------------
DNA (1977bp)
protein (659aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XCX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19226.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
mcpB; methyl-accepting chemotaxis protein
DolZOral124_scaffold_1846_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21561..23150
-----------------
DNA (1590bp)
protein (530aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRF6_CELLD
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADZ82765.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;"
DolZOral124_scaffold_1846_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23175..23516)
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99666.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_1846_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23516..24784)
-----------------
DNA (1269bp)
protein (423aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPX9_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41878.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394
DolZOral124_scaffold_1846_30
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24921..25916
-----------------
DNA (996bp)
protein (332aa)
NADH oxidase domain protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MXI0_FINMA
NADH oxidase {ECO:0000313|EMBL:EXF27581.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
NADH-dependent flavin oxidoreductase
Displaying items 1-30 of 57 in total

View Taxonomy