ggKbase home page

DolZOral124_scaffold_4842

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4842_1
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

233..2191
-----------------
DNA (1959bp)
protein (653aa)
NAD+ synthase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBT1_9PORP
NAD synthetase {ECO:0000313|EMBL:KGN83178.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;
nadE; NAD synthetase
DolZOral124_scaffold_4842_2
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2232..2840
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NCP8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84656.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_4842_3
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2878..3894
-----------------
DNA (1017bp)
protein (339aa)
Heptosyltransferase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GZB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84655.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
heptosyltransferase
DolZOral124_scaffold_4842_4
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3960..4427
-----------------
DNA (468bp)
protein (156aa)
S4 domain protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IDF1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84654.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
S4 domain-containing protein
DolZOral124_scaffold_4842_5
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4473..5006
-----------------
DNA (534bp)
protein (178aa)
phosphoglycerate kinase n=1 Tax=Porphyromonas gulae RepID=UPI00037BF6AE
Phosphoglycerate kinase {ECO:0000313|EMBL:KGN93220.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
phosphoglycerate mutase family protein
DolZOral124_scaffold_4842_6
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5172..5657
-----------------
DNA (486bp)
protein (162aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;"
Ferritin n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NDB1_9PORP
ftn; ferritin
DolZOral124_scaffold_4842_7
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5726..6394)
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PZB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC72818.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
DolZOral124_scaffold_4842_8
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6600..7634)
-----------------
DNA (1035bp)
protein (345aa)
Putative vitamin B12 import system permease protein BtuC n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K2T5_9PORP rbh
Putative vitamin B12 import system permease protein BtuC {ECO:0000313|EMBL:ERJ71449.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;"
iron compound ABC transporter permease
DolZOral124_scaffold_4842_9
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7652..8824)
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis F0568 RepID=U2IH36_PORGN rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGN71245.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="P
iron ABC transporter substrate-binding protein
DolZOral124_scaffold_4842_10
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8845..9675)
-----------------
DNA (831bp)
protein (277aa)
RNA methyltransferase, TrmH family n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2JZC0_9PORP
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ERJ70249.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
RNA methyltransferase
DolZOral124_scaffold_4842_11
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9656..10411)
-----------------
DNA (756bp)
protein (252aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NAH8_9PORP
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:KGN85027.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromo
biotin--acetyl-CoA-carboxylase ligase
DolZOral124_scaffold_4842_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10408..10791)
-----------------
DNA (384bp)
protein (128aa)
PF04237 family protein n=2 Tax=Porphyromonas gingivalis RepID=T2N7S6_PORGN
MmcQ-like protein {ECO:0000313|EMBL:KGN85028.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH86
hypothetical protein
DolZOral124_scaffold_4842_13
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12006..12704
-----------------
DNA (699bp)
protein (233aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7KTY7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI04114.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14
hypothetical protein
DolZOral124_scaffold_4842_14
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12816..13166)
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TW16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN71995.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
DolZOral124_scaffold_4842_15
unknown

Not on your lists

comp(13196..13558)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

DolZOral124_scaffold_4842_16
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13563..14618)
-----------------
DNA (1056bp)
protein (352aa)
NADH(P)-binding protein, PF13460 family n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TU09_9PORP
NADH(P)-binding protein, PF13460 family {ECO:0000313|EMBL:EJU17344.1}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyro
NAD dependent epimerase/dehydratase family protein
DolZOral124_scaffold_4842_17
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14651..15541)
-----------------
DNA (891bp)
protein (297aa)
Virulence factor Mce family protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K4A9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85543.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_4842_18
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15565..16617)
-----------------
DNA (1053bp)
protein (351aa)
Cell wall hydrolase/autolysin n=1 Tax=Porphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198) RepID=F4KKB9_PORAD
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEE12844.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas asacc
DolZOral124_scaffold_4842_trna_2
unknown

Not on your lists

comp(16884..16956)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_4842_trna_1
unknown

Not on your lists

comp(16966..17052)
-----------------
DNA (87bp)
transferRNA
DolZOral124_scaffold_4842_19
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17271..18608)
-----------------
DNA (1338bp)
protein (446aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RU66_9BACE rbh
Cardiolipin synthase {ECO:0000313|EMBL:EOA59341.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
DolZOral124_scaffold_4842_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18640..20670)
-----------------
DNA (2031bp)
protein (677aa)
Peptidase family M13 n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IQ85_9PORP
Peptidase M13 {ECO:0000313|EMBL:KGN82537.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
endopeptidase PepO
DolZOral124_scaffold_4842_21
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20682..21590)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IZX9_9PORP
Nucleotidyltransferase {ECO:0000313|EMBL:KGN71332.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-239
hypothetical protein
DolZOral124_scaffold_4842_22
unknown

Not on your lists

21880..24423
-----------------
DNA (2544bp)
protein (848aa)

This feature has no annotations

DolZOral124_scaffold_4842_23
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24427..25338
-----------------
DNA (912bp)
protein (304aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IWL5_9PORP
mraW; S-adenosyl-methyltransferase MraW
DolZOral124_scaffold_4842_24
unknown

Not on your lists

25361..25687
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

DolZOral124_scaffold_4842_25
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25691..28102
-----------------
DNA (2412bp)
protein (804aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2KAQ3_9PORP
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:ERJ71928.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;
penicillin-binding protein
DolZOral124_scaffold_4842_26
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28110..29609
-----------------
DNA (1500bp)
protein (500aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IVU6_9PORP
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimela te ligase
DolZOral124_scaffold_4842_27
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29623..30879
-----------------
DNA (1257bp)
protein (419aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Porphyromonas macacae RepID=UPI00037A86F2
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
DolZOral124_scaffold_4842_28
unknown

Not on your lists

30899..31834
-----------------
DNA (936bp)
protein (312aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

View Taxonomy