ggKbase home page

DolZOral124_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_250_1
Actinobacillus equuli, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336..2006)
-----------------
DNA (1671bp)
protein (557aa)
Fructose permease IIC component n=1 Tax=Actinobacillus pleuropneumoniae serovar 10 str. D13039 RepID=E0F2M7_ACTPL rbh
PTS system fructose-specific transporter subunits IIBC
PTS system fructose-specific transporter subunits IIBC {ECO:0000313|EMBL:AIZ78608.1}; TaxID=202947 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacill
DolZOral124_scaffold_250_2
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2016..3122)
-----------------
DNA (1107bp)
protein (369aa)
PTS fructose transporter subunit IIA n=1 Tax=Actinobacillus capsulatus RepID=UPI00037538F9
PTS fructose transporter subunit IIA {ECO:0000313|EMBL:EXI61807.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannhei
PTS system, fructose-specific IIA/FPr component
DolZOral124_scaffold_250_3
Leptotrichia wadei, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

3337..4077
-----------------
DNA (741bp)
protein (247aa)
HAD phosphatase, family IIIB n=1 Tax=Leptotrichia wadei F0279 RepID=U2PDD6_9FUSO
HAD phosphatase, family IIIB {ECO:0000313|EMBL:ERK48510.1}; TaxID=888055 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia wadei F0279.;"
aphA; acid phosphatase/phosphotransferase
DolZOral124_scaffold_250_4
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4134..4523)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=5 Tax=Myroides odoratimimus RepID=H1GHA8_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJH13950.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
DolZOral124_scaffold_250_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4625..4843
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88986.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
DolZOral124_scaffold_250_6
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5914)
-----------------
DNA (1035bp)
protein (345aa)
DNA polymerase III, delta subunit n=1 Tax=Haemophilus parasuis 29755 RepID=T2RJJ2_HAEPR
DNA polymerase III subunit delta
DNA polymerase III subunit delta {ECO:0000313|EMBL:CDH99479.1}; TaxID=456298 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus
DolZOral124_scaffold_250_7
Haemophilus sputorum, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5921..8509)
-----------------
DNA (2589bp)
protein (863aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1078483 species="Bacteria; Proteo
Leucine--tRNA ligase n=1 Tax=Haemophilus sputorum HK 2154 RepID=J4TUC9_9PAST rbh
leucyl-tRNA synthetase
DolZOral124_scaffold_250_8
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8713..9267
-----------------
DNA (555bp)
protein (185aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Actinobacillus minor RepID=C5S1I9_9PAST
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EER47201.1}; TaxID=637911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae;
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
DolZOral124_scaffold_250_9
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9346..10239
-----------------
DNA (894bp)
protein (298aa)
High-affinity zinc uptake system protein znuA n=4 Tax=Haemophilus parasuis RepID=U4S531_HAEPR
High-affinity zinc uptake system protein znuA {ECO:0000313|EMBL:EFM95905.1}; TaxID=754259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" sou
Zinc (Zn2+) ABC superfamily ATP binding cassette transporter, binding protein
DolZOral124_scaffold_250_10
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10350..10661
-----------------
DNA (312bp)
protein (104aa)
Putative uncharacterized protein n=1 Tax=Haemophilus parasuis serovar 5 (strain SH0165) RepID=B8F637_HAEPS
hypothetical protein
UPF0267 protein X781_17090 {ECO:0000256|HAMAP-Rule:MF_00684}; TaxID=1432056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia va
DolZOral124_scaffold_250_11
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10664..10849
-----------------
DNA (186bp)
protein (62aa)
DNA gyrase inhibitor YacG n=16 Tax=Pasteurella haemolytica RepID=M4XTI9_PASHA
DNA gyrase inhibitor YacG
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1434215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannh
DolZOral124_scaffold_250_12
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10839..12155
-----------------
DNA (1317bp)
protein (439aa)
Chromosome partition protein MukF n=1 Tax=Haemophilus parasuis serovar 5 (strain SH0165) RepID=MUKF_HAEPS
mukF; condesin subunit F
Chromosome partition protein MukF {ECO:0000255|HAMAP-Rule:MF_01803}; TaxID=557723 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemop
DolZOral124_scaffold_250_13
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12323..13558
-----------------
DNA (1236bp)
protein (412aa)
Saccharopine dehydrogenase n=2 Tax=Pasteurella multocida RepID=F7TN31_PASMD
saccharopine dehydrogenase / homospermidine synthase family protein
Uncharacterized protein {ECO:0000313|EMBL:AAK02456.1}; TaxID=272843 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella.;" source="Pasteurella multocid
DolZOral124_scaffold_250_14
unknown

Not on your lists

13696..14160
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

DolZOral124_scaffold_250_15
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14235..14978)
-----------------
DNA (744bp)
protein (248aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=907488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; A
Carbonic anhydrase n=1 Tax=Aggregatibacter actinomycetemcomitans serotype e str. SC1083 RepID=G4A7I3_AGGAC
carbonate dehydratase
DolZOral124_scaffold_250_16
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15151..16194
-----------------
DNA (1044bp)
protein (348aa)
Peptide ABC transporter permease n=4 Tax=Vibrio harveyi group RepID=A7MSQ1_VIBCB rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KGR34492.1}; TaxID=680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii.;"
DolZOral124_scaffold_250_17
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16199..17251
-----------------
DNA (1053bp)
protein (351aa)
peptide ABC transporter permease n=1 Tax=Vibrio vulnificus RepID=UPI0002FDB790 rbh
ABC transporter permease
ABC-type transport system, permease component {ECO:0000313|EMBL:BAC93016.1}; TaxID=196600 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vu
DolZOral124_scaffold_250_18
Vibrio sp. S234-5, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17280..19217
-----------------
DNA (1938bp)
protein (646aa)
diguanylate cyclase n=1 Tax=Vibrio vulnificus RepID=UPI0002D5F764 rbh
Diguanylate cyclase {ECO:0000313|EMBL:KJR19557.1}; TaxID=1616781 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. S234-5.;"
oligopeptide ABC transporter periplasmic protein
DolZOral124_scaffold_250_19
Vibrio sp. EJY3, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19268..20134
-----------------
DNA (867bp)
protein (289aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Vibrio sp. EJY3 RepID=H2IBV5_9VIBR rbh
oligopeptide transport ATP-binding protein OppD
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:AEX20660.1}; TaxID=1116375 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio
DolZOral124_scaffold_250_20
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20157..20993
-----------------
DNA (837bp)
protein (279aa)
Uncharacterized protein n=2 Tax=Vibrio campbellii RepID=A7MSQ5_VIBCB rbh
ABC oligopeptide transporter ATPase component
Uncharacterized protein {ECO:0000313|EMBL:ABU69645.1}; TaxID=338187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain ATCC
DolZOral124_scaffold_250_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21046..21564
-----------------
DNA (519bp)
protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R989_CLOSW
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL05840.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain AT
DolZOral124_scaffold_250_22
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21639..22832)
-----------------
DNA (1194bp)
protein (398aa)
SdaC protein n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R5J9_PASTR rbh
SdaC protein
SdaC protein {ECO:0000313|EMBL:AGH38370.1}; TaxID=1171377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="Bibersteinia trehalosi USDA-A
DolZOral124_scaffold_250_23
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23003..23629
-----------------
DNA (627bp)
protein (209aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rR
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Haemophilus parainfluenzae ATCC 33392 RepID=F0ET57_HAEPA
23S rRNA methyltransferase
DolZOral124_scaffold_250_24
Aggregatibacter sp. oral taxon 458, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23737..25593
-----------------
DNA (1857bp)
protein (619aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1321772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteur
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Aggregatibacter actinomycetemcomitans RepID=L8U4U9_AGGAC
ATP-dependent metallopeptidase HflB
DolZOral124_scaffold_250_25
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25721..27409
-----------------
DNA (1689bp)
protein (563aa)
long-chain fatty acid--CoA ligase (EC:6.2.1.3)
FadD n=2 Tax=Haemophilus parasuis RepID=U4S228_HAEPR
FadD {ECO:0000313|EMBL:EQA11239.1}; TaxID=1275971 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parasuis D74.;"
DolZOral124_scaffold_250_26
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27496..28656
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI0003088C64
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59568.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
DolZOral124_scaffold_250_27
Actinobacillus ureae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28789..29310
-----------------
DNA (522bp)
protein (174aa)
Flavodoxin n=2 Tax=Actinobacillus RepID=K0G3P1_ACTSU
flavodoxin FldA
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=887324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus ureae ATCC 25
DolZOral124_scaffold_250_28
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29325..29774
-----------------
DNA (450bp)
protein (150aa)
Ferric uptake regulation protein n=1 Tax=Actinobacillus minor 202 RepID=B6E291_9PAST
Ferric uptake regulation protein {ECO:0000313|EMBL:ACI28446.1}; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinoba
ferric uptake regulation protein
DolZOral124_scaffold_250_29
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29871..31094)
-----------------
DNA (1224bp)
protein (408aa)
Uracil permease n=15 Tax=Pasteurella haemolytica RepID=M4XST7_PASHA
Uracil transporter {ECO:0000313|EMBL:KIX31140.1}; TaxID=75985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolytica (Pas
uracil permease
DolZOral124_scaffold_250_30
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31153..33069)
-----------------
DNA (1917bp)
protein (639aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NDD7_9PAST
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EIG23848.1}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemo
ATP-dependent helicase
Displaying items 1-30 of 77 in total

View Taxonomy