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DolZOral124_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_413_1
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1200)
-----------------
DNA (1200bp)
protein (400aa)
DEAD/DEAH box helicase-like protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EW29_9RHOB rbh
DEAD/DEAH box helicase-like protein {ECO:0000313|EMBL:EBA16234.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseob
DEAD/DEAH box helicase
DolZOral124_scaffold_413_2
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1497..1907
-----------------
DNA (411bp)
protein (137aa)
Ferric uptake regulation protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CYT7_9RHOB
Ferric uptake regulation protein {ECO:0000313|EMBL:EEX10555.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter
mur; Manganese uptake regulator
DolZOral124_scaffold_413_3
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..2843
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EW27_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA16232.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
membrane protein
DolZOral124_scaffold_413_4
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2876..4711
-----------------
DNA (1836bp)
protein (612aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQ53_9RHOB rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EAP76593.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseov
ABC transporter, ATP-binding protein
DolZOral124_scaffold_413_5
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4861..5472
-----------------
DNA (612bp)
protein (204aa)
Membrane protein, MarC family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TXB9_9RHOB
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacteriu
membrane protein, MarC family
DolZOral124_scaffold_413_6
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5511..6086
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FR71_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM71289.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
aspartyl protease
DolZOral124_scaffold_413_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6208..7539)
-----------------
DNA (1332bp)
protein (444aa)
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VI73_9RHOB rbh
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein {ECO:0000313|EMBL:EAQ12072.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibac
aminotransferase, DegT/DnrJ/EryC1/StrS family
DolZOral124_scaffold_413_8
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8021..8680)
-----------------
DNA (660bp)
protein (220aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EEB69785.1}; EC=3.1.3.18 {ECO:0000313|EMBL:EEB69785.1};; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
Phosphoglycolate phosphatase n=1 Tax=Ruegeria sp. R11 RepID=B7QVF2_9RHOB rbh
HAD family hydrolase
DolZOral124_scaffold_413_9
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8825..10183
-----------------
DNA (1359bp)
protein (453aa)
Bifunctional protein GlmU n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NNG0_9RHOB rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rue
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
DolZOral124_scaffold_413_10
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10183..12006
-----------------
DNA (1824bp)
protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glmS; glucosamine--fructose-6-phosphate aminotransferase GlmS (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R662_9RHOB rbh
DolZOral124_scaffold_413_11
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12007..12540
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VI69_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ12068.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
pyridoxamine 5'-phosphate oxidase family protein
DolZOral124_scaffold_413_12
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..13214
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VI68_9RHOB rbh
DNA alkylation repair protein {ECO:0000313|EMBL:KAJ55583.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacte
DNA alkylation repair enzyme
DolZOral124_scaffold_413_13
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13373..13921)
-----------------
DNA (549bp)
protein (183aa)
CcmG n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2GL91_9RHOB
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KGM47982.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceani
ccmG; putative thiol-disulfide interchange protein
DolZOral124_scaffold_413_14
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13914..14072)
-----------------
DNA (159bp)
protein (53aa)
hemagglutination activity protein n=1 Tax=Ruegeria conchae RepID=UPI000237A666
Heme exporter protein CcmD {ECO:0000313|EMBL:BAQ70093.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfid
DolZOral124_scaffold_413_15
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..14824)
-----------------
DNA (756bp)
protein (252aa)
Heme exporter protein CcmC n=1 Tax=Sagittula stellata E-37 RepID=A3KA06_9RHOB rbh
Heme exporter protein CcmC {ECO:0000313|EMBL:EBA05949.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellat
ccmC; heme exporter protein CcmC
DolZOral124_scaffold_413_16
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..15608)
-----------------
DNA (657bp)
protein (219aa)
Heme exporter protein B n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4F5_9RHOB rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp.
heme exporter protein CcmB
DolZOral124_scaffold_413_17
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15605..16222)
-----------------
DNA (618bp)
protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Heme exporter protein CcmA n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZF5_9RHOB
ccmA; heme exporter protein CcmA
DolZOral124_scaffold_413_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..17424)
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LR13_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV95581.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolZOral124_scaffold_413_19
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17417..20050)
-----------------
DNA (2634bp)
protein (878aa)
Protein-export membrane protein SecD n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FP29_9RHOB rbh
Protein-export membrane protein SecD {ECO:0000313|EMBL:EDM72032.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
secDF; protein export membrane protein SecD/SecF-fusion protein
DolZOral124_scaffold_413_20
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20061..20522)
-----------------
DNA (462bp)
protein (154aa)
Protein translocase subunit SecD n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWH1_HYPDA
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceani
DolZOral124_scaffold_413_21
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20534..20824)
-----------------
DNA (291bp)
protein (97aa)
Protein translocase subunit yajC n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GHY8_RUEST
protein translocase subunit yajC
Protein translocase subunit yajC {ECO:0000313|EMBL:ABF63728.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp.
DolZOral124_scaffold_413_22
unknown

Not on your lists

21020..21208
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

DolZOral124_scaffold_413_23
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21270..22562
-----------------
DNA (1293bp)
protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RXN9_9RHOB rbh
DolZOral124_scaffold_413_24
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22757..23764)
-----------------
DNA (1008bp)
protein (336aa)
Fatty acid desaturase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VID5_9RHOB
Fatty acid desaturase
Fatty acid desaturase {ECO:0000313|EMBL:AHM05888.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium e
DolZOral124_scaffold_413_25
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23917..25377)
-----------------
DNA (1461bp)
protein (487aa)
GTPase Der n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7ED72_PHAG2 rbh
engA; GTP-binding protein EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobact
DolZOral124_scaffold_413_26
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25495..26820)
-----------------
DNA (1326bp)
protein (442aa)
PQQ enzyme repeat family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQB8_9RHOB rbh
Quinoprotein {ECO:0000313|EMBL:KJS43754.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
PQQ enzyme repeat family protein
DolZOral124_scaffold_413_27
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26925..27584)
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LR02_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KEJ95631.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
hypothetical protein
DolZOral124_scaffold_413_28
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27957..29267
-----------------
DNA (1311bp)
protein (437aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVD1_9RHOB rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDZ43580.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacter
secretion protein HlyD
DolZOral124_scaffold_413_29
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29264..33067
-----------------
DNA (3804bp)
protein (1268aa)
AcrB/AcrD/AcrF family protein, putative n=1 Tax=Roseobacter sp. CCS2 RepID=A4ELG5_9RHOB rbh
AcrB/AcrD/AcrF family protein, putative {ECO:0000313|EMBL:EBA11434.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ro
putative AcrB/AcrD/AcrF family protein
DolZOral124_scaffold_413_30
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33341..34726
-----------------
DNA (1386bp)
protein (462aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4A8_9RHOB rbh
cysS; cysteinyl-tRNA synthetase
Displaying items 1-30 of 64 in total

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