ggKbase home page

DolZOral124_scaffold_567

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_567_1

Not on your lists

3..3572
-----------------
DNA (3570bp)
protein (1190aa)
peptide synthetase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B70086 rbh
COG1020 Non-ribosomal peptide synthetase modules and related proteins {ECO:0000313|EMBL:AHG52994.1}; TaxID=1439867 species="Bacteria; environmental samples.;" source="uncultured bacterium B3TF_MPn2.;"
non-ribosomal peptide synthetase
DolZOral124_scaffold_567_2
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3572..4264
-----------------
DNA (693bp)
protein (231aa)
Phosphopantetheinyl transferase PptA, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SPY9_9RHOB
Phosphopantetheinyl transferase PptA, putative {ECO:0000313|EMBL:EAP76529.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" sour
phosphopantetheinyl transferase
DolZOral124_scaffold_567_3
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4527..5837
-----------------
DNA (1311bp)
protein (437aa)
Chain length determinant protein, putative n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FMP1_PELBH rbh
Chain length determinant protein, putative {ECO:0000313|EMBL:EAU45484.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="
hypothetical protein
DolZOral124_scaffold_567_4
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5858..7279)
-----------------
DNA (1422bp)
protein (474aa)
Exopolysaccharide biosynthesis domain protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QRP1_9RHOB rbh
Exopolysaccharide biosynthesis domain protein {ECO:0000313|EMBL:EPX82308.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" sourc
exopolysaccharide biosynthesis domain protein
DolZOral124_scaffold_567_5
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7532..7921)
-----------------
DNA (390bp)
protein (130aa)
Oxidoreductase, Gfo/Idh/MocA family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K8W8_9RHOB
Oxidoreductase {ECO:0000313|EMBL:KHQ53413.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
oxidoreductase domain-containing protein
DolZOral124_scaffold_567_6

Not on your lists

comp(7997..9622)
-----------------
DNA (1626bp)
protein (542aa)
Oxidoreductase, Gfo/Idh/MocA family protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FVH3_PELBH rbh
COG0673 Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:AHG52999.1}; TaxID=1439867 species="Bacteria; environmental samples.;" source="uncultured bacterium B3TF_MPn2.;"
oxidoreductase domain-containing protein
DolZOral124_scaffold_567_7
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9638..10648)
-----------------
DNA (1011bp)
protein (337aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DVL9_9RHOB rbh
Putative glycosyltransferase {ECO:0000313|EMBL:KGM87332.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius
glycosyl transferase family protein
DolZOral124_scaffold_567_8

Not on your lists

comp(10645..11922)
-----------------
DNA (1278bp)
protein (426aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DVM0_9RHOB rbh
COG0438 Glycosyltransferase {ECO:0000313|EMBL:AHG53001.1}; TaxID=1439867 species="Bacteria; environmental samples.;" source="uncultured bacterium B3TF_MPn2.;"
glycosyl transferase, putative
DolZOral124_scaffold_567_9
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11919..13019)
-----------------
DNA (1101bp)
protein (367aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Ruegeria conchae RepID=UPI000237B563
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70902.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
NAD-dependent epimerase/dehydratase
DolZOral124_scaffold_567_10

Not on your lists

comp(13016..14212)
-----------------
DNA (1197bp)
protein (399aa)
Oxidoreductase domain protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AWQ2_9RHOB rbh
COG0673 Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:AHG53003.1}; TaxID=1439867 species="Bacteria; environmental samples.;" source="uncultured bacterium B3TF_MPn2.;"
oxidoreductase domain-containing protein
DolZOral124_scaffold_567_11
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14393..15151
-----------------
DNA (759bp)
protein (253aa)
WecB/TagA/CpsF family glycosyl transferase n=1 Tax=Citreicella sp. 357 RepID=I1AYD2_9RHOB rbh
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:EIE51503.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source=
glycosyl transferase family protein
DolZOral124_scaffold_567_12
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15376..16149)
-----------------
DNA (774bp)
protein (258aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EPX82316.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EPX82316.1};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacter
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QLH0_9RHOB rbh
3-hydroxyacyl-CoA dehydrogenase
DolZOral124_scaffold_567_13
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16136..17707)
-----------------
DNA (1572bp)
protein (524aa)
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding protein site n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QRQ2_9RHOB rbh
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding protein site {ECO:0000313|EMBL:EPX82317.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
glucose-methanol-choline oxidoreductase
DolZOral124_scaffold_567_14
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17704..19641)
-----------------
DNA (1938bp)
protein (646aa)
Acyltransferase 3 n=1 Tax=Roseovarius sp. TM1035 RepID=A6DZI3_9RHOB rbh
Putative acyltransferase {ECO:0000313|EMBL:KGM88170.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius muco
membrane protein
DolZOral124_scaffold_567_15
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19866..20687
-----------------
DNA (822bp)
protein (274aa)
Enoyl-CoA hydratase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CPI7_9RHOB rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:EFO29380.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.
enoyl-CoA hydratase/isomerase
DolZOral124_scaffold_567_16
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20755..21867
-----------------
DNA (1113bp)
protein (371aa)
putative N6-adenine-specific DNA methylase (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Paracoccus sp. N5 RepID=UPI00037DBD4C
Putative RNA methylase {ECO:0000313|EMBL:EDM31755.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1
DolZOral124_scaffold_567_17
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21991..23196
-----------------
DNA (1206bp)
protein (402aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.-)
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AAV94063.1}; EC=2.3.1.- {ECO:0000313|EMBL:AAV94063.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
Beta-ketoadipyl CoA thiolase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVE4_RUEPO rbh
DolZOral124_scaffold_567_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23209..24201
-----------------
DNA (993bp)
protein (331aa)
Phenylacetic acid degradation protein PaaG n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVE5_RUEPO rbh
paaG; phenylacetic acid degradation protein PaaG
Phenylacetic acid degradation protein PaaG {ECO:0000313|EMBL:AAV94062.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ru
DolZOral124_scaffold_567_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24249..24533
-----------------
DNA (285bp)
protein (95aa)
Phenylacetic acid degradation protein PaaH n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFT0_9RHOB
Phenylacetic acid degradation protein PaaH {ECO:0000313|EMBL:EAQ12706.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sour
paaB; phenylacetic acid degradation protein PaaB
DolZOral124_scaffold_567_20
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24533..25300
-----------------
DNA (768bp)
protein (256aa)
phenylacetate-CoA oxygenase, PaaI subunit (EC:1.14.13.149)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY69_9RHOB rbh
Phenylacetate-CoA oxygenase, PaaI subunit {ECO:0000313|EMBL:EEX08331.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Sil
DolZOral124_scaffold_567_21
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25368..25829
-----------------
DNA (462bp)
protein (154aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGP9_9RHOB
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KEJ96934.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
paaD; phenylacetic acid degradation protein PaaD
DolZOral124_scaffold_567_22
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25842..26915
-----------------
DNA (1074bp)
protein (358aa)
Phenylacetic acid degradation oxidoreductase PaaK n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BAQ2_9RHOB rbh
Phenylacetic acid degradation oxidoreductase PaaK {ECO:0000313|EMBL:EDZ47276.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacteri
paaK; phenylacetic acid degradation oxidoreductase PaaK rbh
DolZOral124_scaffold_567_23
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26928..27689
-----------------
DNA (762bp)
protein (254aa)
Phenylacetic acid degradation protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVF0_RUEPO rbh
phenylacetic acid degradation protein, putative
Phenylacetic acid degradation protein, putative {ECO:0000313|EMBL:AAV94057.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" sourc
DolZOral124_scaffold_567_24
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27830..28426)
-----------------
DNA (597bp)
protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY74_9RHOB
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAV94048.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger
DolZOral124_scaffold_567_25
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28432..29742)
-----------------
DNA (1311bp)
protein (437aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=644107 species="Bacteria;
paaF; phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY75_9RHOB rbh
DolZOral124_scaffold_567_26
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29746..30186)
-----------------
DNA (441bp)
protein (147aa)
phenylacetic acid degradation protein PaaD (EC:3.1.2.-)
Phenylacetic acid degradation protein PaaD n=1 Tax=Ruegeria sp. R11 RepID=B7QYI7_9RHOB
Phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EEB72481.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ru
DolZOral124_scaffold_567_27
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30183..30968)
-----------------
DNA (786bp)
protein (262aa)
Enoyl-CoA hydratase/isomerase PaaB n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVG2_RUEPO rbh
Enoyl-CoA hydratase/isomerase PaaB {ECO:0000313|EMBL:KHQ54446.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Pontic
paaB; enoyl-CoA hydratase/isomerase PaaB
DolZOral124_scaffold_567_28
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31070..33088
-----------------
DNA (2019bp)
protein (673aa)
Uncharacterized protein {ECO:0000313|EMBL:AHD08528.1}; EC=1.2.1.91 {ECO:0000313|EMBL:AHD08528.1};; EC=3.3.2.12 {ECO:0000313|EMBL:AHD08528.1};; TaxID=1423144 species="Bacteria; Proteobacteria; Alphapro
phenylacetic acid degradation protein paaN (EC:1.17.1.7 3.7.1.16)
UPI0003D6BE1B related cluster n=1 Tax=unknown RepID=UPI0003D6BE1B rbh
DolZOral124_scaffold_567_29
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33188..33955
-----------------
DNA (768bp)
protein (256aa)
PaaX domain protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFU0_9RHOB
PaaX family transcriptional regulator {ECO:0000313|EMBL:KEJ90715.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="S
phenylacetic acid degradation operon negative regulatory protein
DolZOral124_scaffold_567_30
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34016..35899)
-----------------
DNA (1884bp)
protein (628aa)
Glutathione-regulated potassium-efflux system protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X9B3_9RHOB rbh
Glutathione-regulated potassium-efflux system protein {ECO:0000313|EMBL:EAQ45645.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter
glutathione-regulated potassium-efflux system protein
Displaying items 1-30 of 53 in total

View Taxonomy