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DolZOral124_scaffold_686

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_686_1
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2256)
-----------------
DNA (2256bp)
protein (752aa)
Chromosome undetermined scaffold_122, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BRH6_PARTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD52187.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
DolZOral124_scaffold_686_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2279..2713)
-----------------
DNA (435bp)
protein (145aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26501.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
DolZOral124_scaffold_686_3
Streptococcus sp. oral taxon 058, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2726..4000)
-----------------
DNA (1275bp)
protein (425aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0KTJ6_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EHI75778.1}; TaxID=861455 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. oral taxon 058
hypothetical protein
DolZOral124_scaffold_686_4
unknown

Not on your lists

comp(4013..4309)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

DolZOral124_scaffold_686_5
unknown

Not on your lists

comp(4319..4621)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

DolZOral124_scaffold_686_6
unknown

Not on your lists

comp(4640..4936)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

DolZOral124_scaffold_686_7
unknown

Not on your lists

comp(4936..5199)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

DolZOral124_scaffold_686_8
unknown

Not on your lists

comp(5183..5794)
-----------------
DNA (612bp)
protein (204aa)

This feature has no annotations

DolZOral124_scaffold_686_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5787..9458)
-----------------
DNA (3672bp)
protein (1224aa)
Type VII secretion protein EssC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA1_9CLOT
Type VII secretion protein EssC {ECO:0000313|EMBL:EKY29047.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
DNA translocase FtsK
DolZOral124_scaffold_686_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(9591..10085)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IIJ9_9FIRM
NUDIX family hydrolase
Tax=BJP_IG2102_Acholeplasmatales_34_18
DolZOral124_scaffold_686_11
Bacillus sp. 17376, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10089..10538)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 17376 RepID=V6SZE5_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ESU31804.1}; TaxID=977905 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 17376.;"
hypothetical protein
DolZOral124_scaffold_686_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10535..10786)
-----------------
DNA (252bp)
protein (84aa)
Putative transcriptional regulator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MHZ8_9CLOT
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGF57554.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperb
DolZOral124_scaffold_686_13
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10829..16642)
-----------------
DNA (5814bp)
protein (1938aa)
S-layer protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DE1F
squalene cyclase
Squalene cyclase {ECO:0000313|EMBL:AEV68705.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clar
DolZOral124_scaffold_686_14
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16796..17698)
-----------------
DNA (903bp)
protein (301aa)
rbsB; D-ribose transporter subunit ; periplasmic-binding compoent of ABC superfamily
Ribose ABC transporter, periplasmic ribose-binding protein id=2177763 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
D-ribose transporter subunit periplasmic-binding compoent of ABC superfamily {ECO:0000313|EMBL:CBH22526.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
DolZOral124_scaffold_686_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17755..18699)
-----------------
DNA (945bp)
protein (315aa)
Ribose ABC transport system, permease protein RbsC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AX41_9CLOT
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:EOD01778.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="C
rbsC; D-ribose transporter subunit ; membrane component of ABC superfamily
DolZOral124_scaffold_686_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18701..20194)
-----------------
DNA (1494bp)
protein (498aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716, ECO:0000313|EMBL:CEN75389.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostri
Heme ABC exporter, ATP-binding protein CcmA n=2 Tax=Clostridium sordellii RepID=T0DXN4_CLOSO
rbsA; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components
DolZOral124_scaffold_686_17
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20198..20593)
-----------------
DNA (396bp)
protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1348973 species="Bacteria; Fir
D-ribose pyranase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DNZ6_BACAZ
rbsD; Ribose ABC transport system, high affinity permease RbsD
DolZOral124_scaffold_686_18
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20571..21506)
-----------------
DNA (936bp)
protein (312aa)
Ribokinase n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HAW4_ILYPC
ribokinase
Ribokinase {ECO:0000313|EMBL:ADO82115.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
DolZOral124_scaffold_686_19
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21517..22518)
-----------------
DNA (1002bp)
protein (334aa)
DNA-binding transcriptional repressor of ribose metabolism n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV78_CLOSD
rbsR; DNA-binding transcriptional repressor of ribose metabolism
DNA-binding transcriptional repressor of ribose metabolism {ECO:0000313|EMBL:CBH22531.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
DolZOral124_scaffold_686_20
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(22647..23987)
-----------------
DNA (1341bp)
protein (447aa)
Transporter n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TBN2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
sodium:neurotransmitter symporter family protein
DolZOral124_scaffold_686_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23999..24226)
-----------------
DNA (228bp)
protein (76aa)
Selenoprotein B,glycine/betaine/sarcosine/D-proline reductase family n=1 Tax=Clostridium ultunense Esp RepID=M1ZDS5_9CLOT
Selenoprotein B,glycine/betaine/sarcosine/D-proline reductase family {ECO:0000313|EMBL:CCQ96726.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
glycine/betaine/sarcosine/D-proline reductase family selenoprotein B
DolZOral124_scaffold_686_22
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24254..25291)
-----------------
DNA (1038bp)
protein (346aa)
Selenoprotein B,glycine/betaine/sarcosine/D-proline reductase family n=1 Tax=Clostridium ultunense Esp RepID=M1Z1M8_9CLOT
Selenoprotein B,glycine/betaine/sarcosine/D-proline reductase family {ECO:0000313|EMBL:CCQ96725.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
sarcosine reductase
DolZOral124_scaffold_686_23
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25301..26590)
-----------------
DNA (1290bp)
protein (430aa)
Glycine reductase, subunit ABC n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM61_9FIRM
beta-aspartyl peptidase
Beta-aspartyl peptidase {ECO:0000313|EMBL:AIZ36773.1}; TaxID=33033 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra.;"
DolZOral124_scaffold_686_24
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26593..26982)
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TBN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGL38939.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str.
hypothetical protein
DolZOral124_scaffold_686_25
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(27085..27732)
-----------------
DNA (648bp)
protein (216aa)
Transcriptional regulator, GntR family n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SM59_9FIRM
Uncharacterized HTH-type transcriptional regulator ydfH {ECO:0000313|EMBL:CRH72470.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;"
GntR family transcriptional regulator
DolZOral124_scaffold_686_26
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27798..28919)
-----------------
DNA (1122bp)
protein (374aa)
PTS system, N-acetylglucosamine-specific IIBC component {ECO:0000313|EMBL:EIJ29191.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EIJ29191.1};; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Pts system, N-acetylglucosamine-specific iibc component n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GGT6_HAEHA
PTS system N-acetylglucosamine-specific transporter subunit IIBC
DolZOral124_scaffold_686_27
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28919..29299)
-----------------
DNA (381bp)
protein (127aa)
Putative uncharacterized protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0PXM9_CLONN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK61418.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
DolZOral124_scaffold_686_28
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29389..30456)
-----------------
DNA (1068bp)
protein (356aa)
Ornithine racemase {ECO:0000313|EMBL:CDF58307.1}; EC=5.1.1.12 {ECO:0000313|EMBL:CDF58307.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" s
Ornithine racemase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQ19_9CLOT
alanine racemase domain-containing protein
DolZOral124_scaffold_686_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30465..31832)
-----------------
DNA (1368bp)
protein (456aa)
Putative reactivating factor for D-ornithine aminomutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AW36_9CLOT
Putative reactivating factor for D-ornithine aminomutase {ECO:0000313|EMBL:EOD01388.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" sou
putative component of D-ornithine aminomutase
DolZOral124_scaffold_686_30
Fusobacterium hwasookii, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(31881..34097)
-----------------
DNA (2217bp)
protein (739aa)
oraE; D-ornithine aminomutase E component (EC:5.4.3.5)
Cobalamin B12-binding domain-containing protein n=1 Tax=Fusobacterium nucleatum ChDC F128 RepID=J8S555_FUSNU rbh
Cobalamin B12-binding domain-containing protein {ECO:0000313|EMBL:EJU08014.1}; TaxID=1216362 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium
Displaying items 1-30 of 51 in total

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