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DolZOral124_scaffold_964

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_964_1
unknown

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2..331
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

DolZOral124_scaffold_964_2
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(638..1291)
-----------------
DNA (654bp)
protein (218aa)
Endonuclease III DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AKH70292.1}; EC=3.2.2.- {ECO:0000313|EMBL:AKH70292.1};; EC=4.2.99.18 {ECO:0000313|EMBL:AKH70292.1};; TaxID=1620392 species=
endonuclease III n=1 Tax=Spongiibacter tropicus RepID=UPI0003B5E1A1 rbh
endonuclease III
DolZOral124_scaffold_964_3
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1301..3982)
-----------------
DNA (2682bp)
protein (894aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S140_9GAMM rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
DolZOral124_scaffold_964_4
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4007..4795)
-----------------
DNA (789bp)
protein (263aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KYP2_9GAMM rbh
DolZOral124_scaffold_964_5
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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5062..5808
-----------------
DNA (747bp)
protein (249aa)
30S ribosomal protein S2 n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KYP3_9GAMM rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.
30S ribosomal protein S2
DolZOral124_scaffold_964_6
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

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5941..6798
-----------------
DNA (858bp)
protein (286aa)
Elongation factor Ts n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KY99_9GAMM rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacter
translation elongation factor Ts
DolZOral124_scaffold_964_7
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

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6921..7649
-----------------
DNA (729bp)
protein (243aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KYP5_9GAMM rbh
DolZOral124_scaffold_964_8
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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7677..8234
-----------------
DNA (558bp)
protein (186aa)
Ribosome-recycling factor n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL3_9GAMM rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=247634 species="Bacteria;
frr; ribosome recycling factor
DolZOral124_scaffold_964_9
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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8243..8971
-----------------
DNA (729bp)
protein (243aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL4_9GAMM rbh
DolZOral124_scaffold_964_10
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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8994..9833
-----------------
DNA (840bp)
protein (280aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 c
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL5_9GAMM rbh
DolZOral124_scaffold_964_11
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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9834..11033
-----------------
DNA (1200bp)
protein (400aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL6_9GAMM rbh
DolZOral124_scaffold_964_12
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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11030..12382
-----------------
DNA (1353bp)
protein (451aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source
RIP metalloprotease RseP n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL7_9GAMM rbh
membrane-associated zinc metalloprotease
DolZOral124_scaffold_964_13
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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12412..14997
-----------------
DNA (2586bp)
protein (862aa)
Outer membrane protein assembly factor BamA n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL8_9GAMM rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OM
outer membrane protein
DolZOral124_scaffold_964_14
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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15027..15539
-----------------
DNA (513bp)
protein (171aa)
Outer membrane protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSL9_9GAMM
Outer membrane protein {ECO:0000313|EMBL:EEB80055.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
putative outer membrane protein OmpH
DolZOral124_scaffold_964_15
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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15539..16573
-----------------
DNA (1035bp)
protein (345aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG gro
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSM0_9GAMM rbh
DolZOral124_scaffold_964_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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16570..17001
-----------------
DNA (432bp)
protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSM1_9GAMM
(3R)-hydroxymyristoyl-ACP dehydratase
DolZOral124_scaffold_964_17
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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16998..17768
-----------------
DNA (771bp)
protein (257aa)
Acyl-(Acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSM2_9GAMM rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
UDP-N-acetylglucosamine acyltransferase
DolZOral124_scaffold_964_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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17952..19079
-----------------
DNA (1128bp)
protein (376aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=247634 species="Ba
Lipid-A-disaccharide synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSM3_9GAMM rbh
lipid-A-disaccharide synthase
DolZOral124_scaffold_964_19
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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19072..19662
-----------------
DNA (591bp)
protein (197aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Gilvimarinus chinensis RepID=UPI00037BCD9E
DolZOral124_scaffold_964_20
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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19700..23290
-----------------
DNA (3591bp)
protein (1197aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00002518}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00002518};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit subfamily, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTL9_9GAMM rbh
DolZOral124_scaffold_964_21
Chelonobacter oris, Chelonobacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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23528..23803
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037E3458
Uncharacterized protein {ECO:0000313|EMBL:KGQ70352.1}; TaxID=505317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Chelonobacter.;" source="Chelonobacter oris
DolZOral124_scaffold_964_22
unknown

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comp(23952..25094)
-----------------
DNA (1143bp)
protein (381aa)

This feature has no annotations

DolZOral124_scaffold_964_23
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25141..25581)
-----------------
DNA (441bp)
protein (147aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU3_9GAMM
vapC2; nucleic acid-binding protein
DolZOral124_scaffold_964_24
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25581..25823)
-----------------
DNA (243bp)
protein (81aa)
Putative virulence-associated protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJU4_9GAMM
Putative virulence-associated protein {ECO:0000313|EMBL:EGG92851.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
virulence associated protein VapB
DolZOral124_scaffold_964_25
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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26450..27397
-----------------
DNA (948bp)
protein (316aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY56_9GAMM rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
DolZOral124_scaffold_964_26
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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27519..28733
-----------------
DNA (1215bp)
protein (405aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY55_9GAMM rbh
tRNA(Ile)-lysidine synthetase
DolZOral124_scaffold_964_27
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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29035..30681
-----------------
DNA (1647bp)
protein (549aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY54_9GAMM rbh
DolZOral124_scaffold_964_28
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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30678..31529
-----------------
DNA (852bp)
protein (284aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z4D3_9SYNE rbh
DolZOral124_scaffold_964_29
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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31554..32840
-----------------
DNA (1287bp)
protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
Enolase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RY52_9GAMM rbh
DolZOral124_scaffold_964_30
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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32865..33176
-----------------
DNA (312bp)
protein (104aa)
Cell division protein FtsB n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV91_9GAMM
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC50
septum formation initiator
Displaying items 1-30 of 122 in total

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