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DolZOral124_scaffold_5485

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_5485_1
unknown

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815..994
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_5485_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1403..1798
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSZ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34487.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DNA methylase
DolZOral124_scaffold_5485_3
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2060..5179
-----------------
DNA (3120bp)
protein (1040aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVX1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGN82249.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
heavy metal efflux pump
DolZOral124_scaffold_5485_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5184..5564
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSZ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34487.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolZOral124_scaffold_5485_5
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5832..7139
-----------------
DNA (1308bp)
protein (436aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Chryseobacterium sp. CF314 RepID=J2TDD6_9FLAO
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:EJL76212.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" sou
CzcA family heavy metal efflux pump
DolZOral124_scaffold_5485_6
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7149..8483
-----------------
DNA (1335bp)
protein (445aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5L8_9FLAO
Secretion protein HylD {ECO:0000313|EMBL:KFF27901.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium v
czcB_2; Cobalt-zinc-cadmium resistance protein CzcB
DolZOral124_scaffold_5485_7
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8627..9316)
-----------------
DNA (690bp)
protein (230aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromo
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GWE8_9PORP
cyclophilin type peptidyl-prolyl cis-trans isomerase
DolZOral124_scaffold_5485_8
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9333..10208)
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBV4_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN72145.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
hypothetical protein
DolZOral124_scaffold_5485_9
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10225..11340)
-----------------
DNA (1116bp)
protein (372aa)
Peptide chain release factor 2 n=1 Tax=Porphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198) RepID=F4KMN0_PORAD
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas as
DolZOral124_scaffold_5485_10
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11351..13183)
-----------------
DNA (1833bp)
protein (611aa)
AMP-binding enzyme n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GRW5_9PORP
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGN84072.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
long-chain-fatty-acid-CoA ligase
DolZOral124_scaffold_5485_11
unknown

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14021..14440
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

DolZOral124_scaffold_5485_12
unknown

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14589..14705
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

DolZOral124_scaffold_5485_13
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14681..17428
-----------------
DNA (2748bp)
protein (916aa)
Export membrane protein SecD / protein-export membrane protein SecF multi-domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TW23_9PORP
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KGN83628.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
secDF; bifunctional preprotein translocase subunit SecD/SecF
DolZOral124_scaffold_5485_14
unknown

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17563..17976
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

DolZOral124_scaffold_5485_15
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18326..19051)
-----------------
DNA (726bp)
protein (242aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VQK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84420.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
beta-phosphoglucomutase
DolZOral124_scaffold_5485_16
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19535..20281)
-----------------
DNA (747bp)
protein (249aa)
phosphoglyceromutase n=1 Tax=Porphyromonas macacae RepID=UPI0003742FA9
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
gpmA; phosphoglyceromutase
DolZOral124_scaffold_5485_17
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20972..21823
-----------------
DNA (852bp)
protein (284aa)
ABC transporter, ATP-binding protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IZZ0_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ73050.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromon
ABC transporter ATP-binding protein
DolZOral124_scaffold_5485_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21845..22234
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSZ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34487.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DNA methylase
DolZOral124_scaffold_5485_19
unknown

Not on your lists

22467..23252
-----------------
DNA (786bp)
protein (262aa)

This feature has no annotations

DolZOral124_scaffold_5485_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23257..23619
-----------------
DNA (363bp)
protein (121aa)
Transcriptional regulator, GntR family n=2 Tax=Porphyromonas RepID=S4NKL4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85724.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
transcriptional regulator
DolZOral124_scaffold_5485_21
unknown

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23635..24450
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

DolZOral124_scaffold_5485_22
unknown

Not on your lists

24574..25236
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

DolZOral124_scaffold_5485_23
unknown

Not on your lists

25223..25444
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

DolZOral124_scaffold_5485_24
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25756..26331
-----------------
DNA (576bp)
protein (192aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=887901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porph
Superoxide dismutase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBN6_9PORP rbh
superoxide dismutase
DolZOral124_scaffold_5485_25
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26564..27727
-----------------
DNA (1164bp)
protein (388aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NDP3_9PORP
Membrane protein {ECO:0000313|EMBL:KGN84268.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860
hypothetical protein
DolZOral124_scaffold_5485_26
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27733..28218
-----------------
DNA (486bp)
protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1ND26_9PORP
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
DolZOral124_scaffold_5485_27
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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28331..28516
-----------------
DNA (186bp)
protein (62aa)
Transposase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L4J5_SAPGL
transposase
Transposase {ECO:0000313|EMBL:AFC23919.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).
DolZOral124_scaffold_5485_28
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28621..30288)
-----------------
DNA (1668bp)
protein (556aa)
Transporter, Ompp1/FadL/TodX family n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TNZ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN70040.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
hypothetical protein
DolZOral124_scaffold_5485_29
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30301..31515)
-----------------
DNA (1215bp)
protein (405aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VS29_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84012.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
putative secreted protein
DolZOral124_scaffold_5485_30
unknown

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comp(32322..33452)
-----------------
DNA (1131bp)
protein (377aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

View Taxonomy